Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00134 ATGTCGGGATCTGACATGGCAAGCAGGGAGCAATTCACGGTTGGGATGCACAAACCCCAACCCCAACCCCAACAACAACAACCTCAGCTTCATCAAAACAACATGCGTATGGACTATGCTGCTGCTGACGGCACCGCTGTTTTCGCCCCTCCTACCGTTACCGTTAACATTAACGGCGGAGAATCCTCTCCGGCGGTGCCTCCGGGCCTGGGCCTGGcccagccccagccccagccccagcccATGATGGTTAACTCCTCCGAACCAATTAAGAGAAAGAGGGGAAGGCCCAGGAAATATGGGCCTCACGGTGGCATGGCCTTGGCTTTGAACACCACCACTCCTCCTGGCGGCGCCGCCGTGCCGGTTGGCCAGTCCGGTGGGGCATTTCCACCGGCTCCTCTTTCGGATTCGGCCTCAGCTGGTACCGTGAAGCGCAGGGGCAGACCTCGTGGTTCTGTCAACAAGAATAAGAAGAATAACAGCTCTAAGTATTCTGggccaggatcttggtttactccgcatgtcattaccgtgaaagctggagagGATTTGTCAGCAAGAATTATGACAATTTCCCAGAGTAGTTCAAGAAATATTTGCATCTTAACAGCAAATGGAGCCATATCTAATGTGACACTTCGACAACCTGCCTCATCTGGAGGAACTGTGACTTATGAGGGGCGATTTGAGATCCTATCACTTGGAGGTTCTTTTTTTCTTGCTGGAACTGAAAGGGCTGGGGGGCTGAGTGTGTCCTTGTCAGGGCCAGATGGCCGTGTCTTGGGCGGTGGAGTTGCAGGTCTTTTGGTAGCTGCTTCCCCTGTTCAGATTGTTTTGGCAAGCTTTGTTTCTGATGTTCGCAAGCACTTCAAGCATGCAAAGCAGATGCAGAATGCAAAGGTTTCCATAGCAGCAGGCCAAAGCAGCTCACCATCAAGAGGCACTCTCAGTGAGTCTTCAGGTGGGGTTGGGAGTGGGAGCCCACTAAACCAAAGCACAGGAGCCTGCAACAACACCATGAACAACTGTACCACCCCAACACAAAGCTTTCAAGGCATGCCCTGGAAGTAG 1074 0.486 MSGSDMASREQFTVGMHKPQPQPQQQQPQLHQNNMRMDYAAADGTAVFAPPTVTVNINGGESSPAVPPGLGLAQPQPQPQPMMVNSSEPIKRKRGRPRKYGPHGGMALALNTTTPPGGAAVPVGQSGGAFPPAPLSDSASAGTVKRRGRPRGSVNKNKKNNSSKYSGPGSWFTPHVITVKAGEDLSARIMTISQSSSRNICILTANGAISNVTLRQPASSGGTVTYEGRFEILSLGGSFFLAGTERAGGLSVSLSGPDGRVLGGGVAGLLVAASPVQIVLASFVSDVRKHFKHAKQMQNAKVSIAAGQSSSPSRGTLSESSGGVGSGSPLNQSTGACNNTMNNCTTPTQSFQGMPWK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00134 357 MobiDBLite consensus disorder prediction 304 334 - -
Gma04g00134 357 Pfam Plants and Prokaryotes Conserved (PCC) domain 174 284 IPR005175 -
Gma04g00134 357 Gene3D - 174 306 - -
Gma04g00134 357 ProSiteProfiles PPC domain profile profile. 166 305 IPR005175 -
Gma04g00134 357 SUPERFAMILY AF0104/ALDC/Ptd012-like 170 287 - -
Gma04g00134 357 SMART AT_hook_2 91 103 IPR017956 GO:0003677
Gma04g00134 357 SMART AT_hook_2 144 156 IPR017956 GO:0003677
Gma04g00134 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10-LIKE ISOFORM X1 6 341 - -
Gma04g00134 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 6 341 IPR039605 GO:0003680
Gma04g00134 357 MobiDBLite consensus disorder prediction 1 39 - -
Gma04g00134 357 CDD DUF296 173 283 IPR005175 -
Gma04g00134 357 MobiDBLite consensus disorder prediction 1 34 - -
Gma04g00134 357 MobiDBLite consensus disorder prediction 52 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00134 Gma-Chr4 1144936 1147820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00134 1 357 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 45.431 4.78e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00134 - - gmx:100808432 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00134 04 1144936 1147820 Gma04g00134 04 1144936 1147820 ECH
Gma04g00134 04 1144936 1147820 Gma06g00127 06 1109577 1113106 GST