Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00126 ATGTCGAGCTCACTGGCGGAGAAGTCCACCTTCTCTCGGACTTGTACTCTTCTGAGGCAATACCTCAAGGAGAAGGGCAGCTTTGGAGACCTTACCCTCGGGATTGCATTGCCATGCACCAACGGTTCCCCTGACACATCATGTCACTCTGCAACAACCATGCAGTCTGTTTATTCTCGCCACTTGGAGATTCCAACTTTTATTAACCCAAGGTCTACGGAGAAGGAGGCTAAAGCTGCTCAGTTGACTATCTTCTATGATGGGCAAGTTGTTGTGTTTGATGATTTTCCTGCTGATAAAGTGCAGGAGATGATGTCTTTGGCCTTGGCAACCAAGGGAATTTCCCAAAGCCAGAACTCCTCTGCATATGCTCAAACTCATAACCAGCAAGGAAATAATCATCCTTCAAGTATTCCTAATATCATTCCTCAAGCGCCATCCACACCAATTGTTAATGACATGCCAATCGCCAGGAAAGCTTCCCTTCATCGGTTCCTTGAGAAGAGGAAAGATAGAATTGCTGCCATCGCCATATCAAACAAACAGTCCTATCTCTGCTCCTAA 564 0.461 MSSSLAEKSTFSRTCTLLRQYLKEKGSFGDLTLGIALPCTNGSPDTSCHSATTMQSVYSRHLEIPTFINPRSTEKEAKAAQLTIFYDGQVVVFDDFPADKVQEMMSLALATKGISQSQNSSAYAQTHNQQGNNHPSSIPNIIPQAPSTPIVNDMPIARKASLHRFLEKRKDRIAAIAISNKQSYLCS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00126 187 ProSiteProfiles Tify domain profile. 75 110 IPR010399 -
Gma04g00126 187 PANTHER PROTEIN TIFY 10A 6 176 - -
Gma04g00126 187 Pfam tify domain 77 108 IPR010399 -
Gma04g00126 187 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 176 IPR040390 -
Gma04g00126 187 SMART tify_2 75 110 IPR010399 -
Gma04g00126 187 MobiDBLite consensus disorder prediction 119 145 - -
Gma04g00126 187 Pfam Jas motif 155 175 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00126 Gma-Chr4 1063035 1065037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00126 6 177 Tify Gene Family AT1G19180 38.426 4.08e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma04g00126 tify 4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00126 K13464 - gmx:100807356 345.125