Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00117 atgggcatagtgtggtttgggttcttgttgctgctgctgagtcaggtgacattggagcagattgagccactgagttccgctgaggagcgagaatcgttgctggaactaagggcttctctggggttgaggagcaaggagtggccaagaaagccagacccttgtttaatctgggttggaatcacgtgccagaatggtcgagtcgttgggatcaatatctctgggtttagaagaaccagaattgggaggaggaacccgcaatttgcagtggatgctttggccaatttcaccctcttgcagaccttcaatgcctccaatttcgtcctttctggccctattcctgattggtttggtctctctctcccttcgctcagagtgcttgatcttcgtttttgctccattgttgatgctattccctccactcttggcaatttaaccaacctcactggtctctatctctctgacaacaacctcattgggaatgttcctgggactttgggtcaactcttggccctttcggttcttgatctttccaggaattctcttactggctccgtaccagcctctttcgcctttctttcgaatctttcttcccttgacctgtctgctaactttttgtcgggggcggttcccaccggcatagggactctttccaggctgcagtacttgaatctttccaacaatggccttgcttctttgcctgcccaattggggggtcttgctagcttagttgaccttgatcttagtgagaattctttcgttggtgttggattgcctctggatTTGACCGGGTTGAGGAACTTGAGGAGGATGATACTCGCAAACAGCATGCTCTCTGGAGTTCTGCCCGGGAGGTTGTTTAGTGATTCGTTGCAGTTCCTAGTGCTGAGGCAAAACAATTTTAGTGGTTCTTTGCCTGTTGAGTTGTGGTCTCTGCCAAGATTGAGCTTCCTTGATGTCTCTGCCAATAACTTCAGTGGTCTGCTTCCCAATTCCAGTTCTGCTGCTAATAATGCTACTGTTGCGGTGCTCAATATTTCACATAACAAGTTTTATGGAGGCCTCACTCCTGCTCTCAGAAGGTTTGCTTTCGTTGATCTTTCCAGCAATTATTTTGAGGGCAAGGTTCTGGATTTCATGCGTAATGTATCTCTAGATATTAACTGCCTCCAGAATGCGACAAATCAGAGGTCAACGGTGAAATGTGCATCATTTTATGCAGAGAGGGGGCTCAGTTTTGACAATTTTGGACGCCCAAATACGACAAAACCTCCCGCCGCAGCCAAAAGCTCTGGGAAGAGCAATAAAACTAAGATTATATTGGCAGCAGTCTTGGGTGGAGTGGGTTTAATTGCAATTTTGGTGTTTCTACTAGTTCTGTTGCTTCTGTGTGCTCGTAAGAGGGGTAATTCAAATCAGAGAGGAAATGGTGTGGGTCCTGCTCCTGTTGGCAGTAGTCCTCCAAATCCCGGTGTACCAATCGACTTTCCAAATGTCGGAGATTCATTTACCTATCATCAGTTGCTCCAGGCAACAGGAGATTTCAATGATGCAAATCTTATCAAGCATGGCCACACTGGGGATTTCTTCAATGGTGTTCTGGAAAGTGGGATTCCTATTGTTATCAAAAGGATCGACACGCGCTCAGCTAAAAAGGAGGCTTACCTGTCGGAATTGGACTTCTTCAATAAGGTTTCTCATCAAAGATTTGTTCCTTTGTTAGGTCATTGCTTTGAAAATGAGAATGAGAAGTTCCTGGTTTATAAACGCACGCCAAATGGGGACTTGTCTAATTGCTTGTACTACAAAAACACATCTGAAGATGGTACTTCGCAATCATTGGATTGGATAACTAGGTTAAAAATTGCTACTGGAGCAGCAGAGGCCCTATCATATCTACATCATGAATGTGTTCCACCGATTGTTCACAGAGATATTCAAGCAAGCAGTATACTTCTAGACGACAAATATGAAGTTCGGTTAGGGAGTTTAAGTGAAGTTTGTGCTCAAGAAGCTGATATTCATCAAAGTAAAATCACCCGGTTTCTGCGGTTGCCTCAGTCTTCTGAACAAGGCACATCTGgttcatcaacatcaatttgtgcctatgacgtttattgttttggaaaagttttacttgagctggtgacGGGTAAGCTGGGAATGAGTGCAGCTAGTGAGGCCGAAGTAAAGGAATGGTTTGATCAGATTCTACCTTGCATTAGTATGTATGATAAGgagctagtaacaaaaattgttgatccgtcaatggttgttgatgaggatttcttagaggaaatatgggctatatccattGTTGCCAGGTCTTGCCTAAATCCTAAACCTTCAAGGAGACCCCCAATGAGATATGTTCTCAAGGCTCTGGAAAACCCTTTAAAGGTTGTGAGGGAAGAAAATTCCAGTTCTGCGCGGCTTAGAGCAACCTCTTCTAGAGGCTCTTGGAATGCTACGTTGTTTGGTAGTTGGCGTCAGAGTTCTTCCGATGTAACAGTTACTCCAGCAGCCTCTGGTACAAAACTCGAAAGAGCTAGCAGTTTAAAGCTGTCAGGAACTACCGGTTCGCAGTCACAGGGTAGTTTCCACAATGGTGGAGGTGAGATTTCGTCATCGCGGAGACGACATTCAAAGGAGATATTCCCAGAGCCATCTGGGGTACATGATGTAGAGAGGTTGGAGCTTCAATAG 2703 0.2908 MGIVWFGFLLLLLSQVTLEQIEPLSSAEERESLLELRASLGLRSKEWPRKPDPCLIWVGITCQNGRVVGINISGFRRTRIGRRNPQFAVDALANFTLLQTFNASNFVLSGPIPDWFGLSLPSLRVLDLRFCSIVDAIPSTLGNLTNLTGLYLSDNNLIGNVPGTLGQLLALSVLDLSRNSLTGSVPASFAFLSNLSSLDLSANFLSGAVPTGIGTLSRLQYLNLSNNGLASLPAQLGGLASLVDLDLSENSFVGVGLPLDLTGLRNLRRMILANSMLSGVLPGRLFSDSLQFLVLRQNNFSGSLPVELWSLPRLSFLDVSANNFSGLLPNSSSAANNATVAVLNISHNKFYGGLTPALRRFAFVDLSSNYFEGKVLDFMRNVSLDINCLQNATNQRSTVKCASFYAERGLSFDNFGRPNTTKPPAAAKSSGKSNKTKIILAAVLGGVGLIAILVFLLVLLLLCARKRGNSNQRGNGVGPAPVGSSPPNPGVPIDFPNVGDSFTYHQLLQATGDFNDANLIKHGHTGDFFNGVLESGIPIVIKRIDTRSAKKEAYLSELDFFNKVSHQRFVPLLGHCFENENEKFLVYKRTPNGDLSNCLYYKNTSEDGTSQSLDWITRLKIATGAAEALSYLHHECVPPIVHRDIQASSILLDDKYEVRLGSLSEVCAQEADIHQSKITRFLRLPQSSEQGTSGSSTSICAYDVYCFGKVLLELVTGKLGMSAASEAEVKEWFDQILPCISMYDKELVTKIVDPSMVVDEDFLEEIWAISIVARSCLNPKPSRRPPMRYVLKALENPLKVVREENSSSARLRATSSRGSWNATLFGSWRQSSSDVTVTPAASGTKLERASSLKLSGTTGSQSQGSFHNGGGEISSSRRRHSKEIFPEPSGVHDVERLELQ 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00117 900 MobiDBLite consensus disorder prediction 471 490 - -
Gma04g00117 900 Gene3D Transferase(Phosphotransferase) domain 1 590 816 - -
Gma04g00117 900 MobiDBLite consensus disorder prediction 839 872 - -
Gma04g00117 900 ProSiteProfiles Protein kinase domain profile. 514 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00117 900 ProSiteProfiles Leucine-rich repeat profile. 218 240 IPR001611 GO:0005515
Gma04g00117 900 MobiDBLite consensus disorder prediction 839 900 - -
Gma04g00117 900 Gene3D Ribonuclease Inhibitor 286 401 IPR032675 -
Gma04g00117 900 Gene3D Ribonuclease Inhibitor 186 285 IPR032675 -
Gma04g00117 900 PANTHER BNAA07G03560D PROTEIN 8 183 - -
Gma04g00117 900 PANTHER BNAA07G03560D PROTEIN 181 843 - -
Gma04g00117 900 SUPERFAMILY Protein kinase-like (PK-like) 488 794 IPR011009 -
Gma04g00117 900 MobiDBLite consensus disorder prediction 873 900 - -
Gma04g00117 900 PRINTS Leucine-rich repeat signature 171 184 - -
Gma04g00117 900 PRINTS Leucine-rich repeat signature 192 205 - -
Gma04g00117 900 SMART LRR_typ_2 144 167 IPR003591 -
Gma04g00117 900 SMART LRR_typ_2 192 215 IPR003591 -
Gma04g00117 900 SMART LRR_typ_2 168 191 IPR003591 -
Gma04g00117 900 SMART LRR_typ_2 120 143 IPR003591 -
Gma04g00117 900 SMART LRR_typ_2 216 239 IPR003591 -
Gma04g00117 900 SMART LRR_typ_2 311 334 IPR003591 -
Gma04g00117 900 SMART LRR_typ_2 264 288 IPR003591 -
Gma04g00117 900 PANTHER RECEPTOR-LIKE PROTEIN 55 181 843 - -
Gma04g00117 900 PANTHER RECEPTOR-LIKE PROTEIN 55 8 183 - -
Gma04g00117 900 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Gma04g00117 900 Pfam Leucine rich repeat 193 251 IPR001611 GO:0005515
Gma04g00117 900 SUPERFAMILY L domain-like 89 412 - -
Gma04g00117 900 Pfam Protein tyrosine and serine/threonine kinase 520 791 IPR001245 GO:0004672|GO:0006468
Gma04g00117 900 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Gma04g00117 900 Gene3D Phosphorylase Kinase; domain 1 494 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00117 Gma-Chr4 990513 995724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00117 29 686 Miscellaneous Gene Families AT2G16250 56.607 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Gma04g00117 PK_Tyr_Ser-Thr 6.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00117 - - gmx:100805769 1638.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00117 04 990513 995724 Gma04g00117 04 990513 995724 ECH