Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00115 ATGGCCTCCAGCACTTTGAGCAAACAAAAGCCTTATGATTCGTGTTGGACCCCAAAACAGAACAAGGTGTTTGAAAAGGCACTTGCAAAGTATGACAAGGATACCCCTGACCGCTGGCACAATGTAGCCAAAGCAATTGGTGGTAAATCAGAAGATGATGTTAAGAGACACTATCAGATACTCTTGGAGGATCTCAGGCACATTGAGTCTGGCCATGTTCCCATTCCCAATTACAAATCAACACCAACTACCTTTCCTCTTTCAACAACACTCCTTATCTGCTTGCCCCAGGCTTCTGAAGTATCTAAAGCTGAAATGGTTTGA 324 0.4383 MASSTLSKQKPYDSCWTPKQNKVFEKALAKYDKDTPDRWHNVAKAIGGKSEDDVKRHYQILLEDLRHIESGHVPIPNYKSTPTTFPLSTTLLICLPQASEVSKAEMV 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00115 107 ProSiteProfiles Myb-like domain profile. 16 62 IPR001005 -
Gma04g00115 107 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Gma04g00115 107 SMART sant 12 64 IPR001005 -
Gma04g00115 107 Pfam Myb-like DNA-binding domain 15 59 IPR001005 -
Gma04g00115 107 Gene3D - 9 75 - -
Gma04g00115 107 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Gma04g00115 107 CDD SANT 16 62 IPR001005 -
Gma04g00115 107 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00115 Gma-Chr4 962151 962922 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma04g00115 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00115 - - gmx:100805232 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00115 04 962151 962922 Gma04g00115 04 962151 962922 ECH