Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00101 ATGGCTCCAAAGAAGGACAAGGCTCCCCCACCTTCATCCAAGCCTGCCAAGTCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGTAAGCAAAAGGAAAAGGTGAATAACATGGTGCTCTTCGATCAGGGTACCTATGACAAGCTCCTCTCTGAGGCACCCAAATACAAGCTCATTACTCCTTCCATTCTCTCTGACCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCTATTAGGGAATTGATGGCTAGAGGTTCAATCAGGATGGTGTCTGCCCATGCAAGTCAGCAGATTTACACTAGAGCTACAAACACCTAG 327 0.4801 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00101 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
Gma04g00101 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Gma04g00101 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Gma04g00101 108 MobiDBLite consensus disorder prediction 1 36 - -
Gma04g00101 108 Gene3D - 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00101 Gma-Chr4 881037 882531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00101 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 1.37e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00101 K02975 - gmx:100499810 162.155