Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00044 ATGCGACTCAGCATTGTGGGTATCGAAGCAATGCATAGAGCGATCTCGTTTCTCATTCAACCGCGATGCCTCCTTCTCATAGTTGTTCTCTCAATTTTCTTGATTCTCGCATTATCTGGTTCCAAACGAGTTGAAGAGAAAGAAGAAGAACTTGAAATTACAGATAGAGTATTCTTGGATGTTGATATTGATGGACAGCGTCTAGGTAGGATTCTCATTGGATTATATGGCAAAGTTGTACCAAAAACTGTGGAAAATTTTAGAGCTTTGTGCACAGGGGAGAAAGGAAAGAATGCCAGTGGTGTAAAACTTCATTACAAAGGAATACCATTTCATAGGATAATATCAGGTTTCATGATTCAGGGCGGTGACATTGTTCATCATGATGGTAGAGGATATGAATCAATTTATGGTGGCACTTTTCCTGATGAGAATTTCAAGATAAACCATTCTAATGCTGGTGTAGTCTCTATGGTGAATTCAGGTCCTGATTCCAATGGCTCACAGTTTTTTATTACAACAGTGAAGACCGCTTGGTTAGATGGAGAACATGTTGTTTTTGGCAAGGTTGTCCAAGGCATGGATACTGTGTTTGCAATTGAAGGGGGTGCTGGAACCTACAATGGGAAACCCAGAAAGAAGGTAGTTATTGCAGACTCTGGAGAGATACCCAAGAGCCAGTGGGATATGGAAAGATGA 699 0.4063 MRLSIVGIEAMHRAISFLIQPRCLLLIVVLSIFLILALSGSKRVEEKEEELEITDRVFLDVDIDGQRLGRILIGLYGKVVPKTVENFRALCTGEKGKNASGVKLHYKGIPFHRIISGFMIQGGDIVHHDGRGYESIYGGTFPDENFKINHSNAGVVSMVNSGPDSNGSQFFITTVKTAWLDGEHVVFGKVVQGMDTVFAIEGGAGTYNGKPRKKVVIADSGEIPKSQWDMER 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00044 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 35 231 - -
Gma04g00044 232 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 61 220 IPR002130 GO:0000413|GO:0003755
Gma04g00044 232 Gene3D - 42 229 IPR029000 -
Gma04g00044 232 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 58 222 IPR002130 GO:0000413|GO:0003755
Gma04g00044 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 75 90 IPR002130 GO:0000413|GO:0003755
Gma04g00044 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 123 IPR002130 GO:0000413|GO:0003755
Gma04g00044 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 154 169 IPR002130 GO:0000413|GO:0003755
Gma04g00044 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 169 181 IPR002130 GO:0000413|GO:0003755
Gma04g00044 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 182 197 IPR002130 GO:0000413|GO:0003755
Gma04g00044 232 SUPERFAMILY Cyclophilin-like 53 223 IPR029000 -
Gma04g00044 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 35 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00044 Gma-Chr4 385412 389850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00044 69 220 U-box Gene Family AT5G67530 42.484 2.99e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00044 - - gmx:100808240 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00044 04 385412 389850 Gma04g00044 04 385412 389850 ECH
Gma04g00044 04 385412 389850 Gma06g00040 06 366613 370953 GST