Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00042 ATGGCTAACATTATGCGGAATGCTGATCCTCCCGCGCTCCTTTCCTGCAACTTGTTGTTGTTGTTTTTCATTATTCTCTTTAGTTTTCTCCCACAAACCATAGCGCTGCAGTATCAAGTTTCGAAAACATTCATCTTCAGAATCGATTCAGAATCGAAGCCGTCAGTTTTCCCCACACACTACCACTGGTACACCTCCGAGTTCGCAGACCCAACCCGCATCCTCCATCTCTACGACACCGTTTTCCACGGCTTCTCCGCAGTTCTCACCCACCAACAAGTCGCTTCTCTCGGCCAGCACCCCTCCGTCCTCGCCGTCTTCGAGGACCGCCGCCGCCACCTTCACACCACTCGCTCCCCTCAGTTTGTTGGCCTCAGAAACCAGCGTGGCCTGTGGTCCGAAACTGACTACGGATCCGACGTTATCATCGGAGTGTTCGACACTGGAATCTGGCCGGAGCGCCGCAGCTTCAGCGACTCCAACTTAGGCCCCATTCCTAAACGCTGGAAAGGGGTTTGCGAAAGCGGCGTGAGATTCTCTCCCAGTAACTGTAACAGGAAATTGATCGGTGCCAGATTCTTCTCTAAAGGCCACGAGGCAAGCGGCACTTCCTTTAACGACACCGTCGAATTCCGTTCGCCTCGAGACGCGGATGGCCACGGAACCCACACGGCGTCAACCGCGGCGGGCCGTTACGTTTTCGAAGCCAGCATGGCCGGCTATGCTTTTGGAGTCGCAAAGGGCGTGGCTCCCAAAGCAAGACTAGCCATGTACAAGTTGTGTTGGAAGAATTCCGGTTGCTTTGACTCTGACATTCTCGCGGCCTTTGACGCCGCCGTGGCCGACGGCGTCGACGTCATTTCTATGTCCATCGGCGGTGGCGACGGCATTTCCTCCCCTTACTATCTTGACCCCATTGCCATCGGGTCTTACGGTGCAGTTTCAAGAGGTGTGTTTGTGTCTTCTTCGGGTGGAAACGACGGGCCCAGTGGCATGTCGGTGACAAACCTCGCTCCGTGGTTGACAACCGTCGGAGCAGGCACCATTGATCGTGATTTTCCGGCGGAGGTTATATTGGGAAACGGACGAAGACTCTCCGGGGTATCTCTGTACTCCGGAGAGCCGTTGAAGGGGAAAATGTATCCCTTAATATACCCCGGAAAATCAGGGGTTCTGACGGATTCTCTGTGCATGGAAAACTCATTAGACCCCGAACTGGTAAAAGGGAAGATAGTGGTTTGCGACAGAGGAAGTAGTGCGAGGGTTGCGAAGGGGTTGGTGGTGAAGAAAGCCGGTGGAGTGGGAATGATTCTGGCTAACGGAATATCCAACGGAGAAGGTCTTGTTGGGGACGCTCATCTTCTTCCCGCGTGTGCGCTTGGTGCTAACTTTGGAGACGAAATCAAAGAATACATTAATTTCTCCGCGAACCCCACGGCTACAATTGATTTCAAAGGCACCGTGGTGGGAATCAGACCGGCACCCGTTGTGGCGTCGTTTTCGGCGAGGGGGCCCAACGGGTTGAGTTTGGAAATACTTAAACCGGATTTGACGGCACCGGGGGTCAACATTCTGGCGGCCTGGACCGGTGGGGTTGGGCCTTCTGGGTTGGACTCCGACACCAGAAGAACCGAATTCAACATATTGTCGGGCACCTCAATGGCGTGTCCTCACGTGAGTGGCGCAGCGGCCTTGTTGAAGTCGGCGCACCCTGATTGGAGCCCCGCGGCCATAAGGTCTGCCATGATGACAACCGCCACGGTTTTTGACAACACCAACGCTCTGATGATTGATCAAGCCACCGGGAATGCTTCCACGCCCTATGATTTTGGCGCTGGCCATCTCAACCTCGCTCTCGCAATGGACCCTGGCTTGGTTTACAACATTACCCCCCATGATTATGTCACCTTCCTCTGTGCTATTGGTTACGGGCCCAGGTTGATTCAGGTCATTACCGGATCGCCGCCCAATTGTCCTCGGAGGAGGCCCTTGCCGGAGAATCTCAATTACCCGTCGTTTGTGGCGGTCTTACCGGTGTCGTCGTCGTTGTTGAGCAAGACGTTCTTCAGGACGGTGACGAATGTGGGCCCGCCGAGTGCGGTGTATCGGGTGAGGGTGGAGACGCAGGCGGAGGGGGTGGCGGTGACGGTGAGGCCGTCGCAGCTTGTATTTTCGGAAGCAGTTAAGAAGCGGAGTTTTGTGGTGACTGTGACGGCGGATGGACGGAATCTGGAGCTGGGTCAGGCTGGGGCAGTGTTCGGGTCCCTTTCGTGGACGGATGGGAAGCACGTGGTTCGGAGCCCCATGGTGGTTACTCAAGCTCAACCGCTTTAA 2334 0.5536 MANIMRNADPPALLSCNLLLLFFIILFSFLPQTIALQYQVSKTFIFRIDSESKPSVFPTHYHWYTSEFADPTRILHLYDTVFHGFSAVLTHQQVASLGQHPSVLAVFEDRRRHLHTTRSPQFVGLRNQRGLWSETDYGSDVIIGVFDTGIWPERRSFSDSNLGPIPKRWKGVCESGVRFSPSNCNRKLIGARFFSKGHEASGTSFNDTVEFRSPRDADGHGTHTASTAAGRYVFEASMAGYAFGVAKGVAPKARLAMYKLCWKNSGCFDSDILAAFDAAVADGVDVISMSIGGGDGISSPYYLDPIAIGSYGAVSRGVFVSSSGGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPAEVILGNGRRLSGVSLYSGEPLKGKMYPLIYPGKSGVLTDSLCMENSLDPELVKGKIVVCDRGSSARVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGANFGDEIKEYINFSANPTATIDFKGTVVGIRPAPVVASFSARGPNGLSLEILKPDLTAPGVNILAAWTGGVGPSGLDSDTRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATVFDNTNALMIDQATGNASTPYDFGAGHLNLALAMDPGLVYNITPHDYVTFLCAIGYGPRLIQVITGSPPNCPRRRPLPENLNYPSFVAVLPVSSSLLSKTFFRTVTNVGPPSAVYRVRVETQAEGVAVTVRPSQLVFSEAVKKRSFVVTVTADGRNLELGQAGAVFGSLSWTDGKHVVRSPMVVTQAQPL 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00042 777 CDD Peptidases_S8_3 113 587 IPR034197 -
Gma04g00042 777 Pfam Fibronectin type-III domain 667 771 IPR041469 -
Gma04g00042 777 Pfam Subtilase family 138 598 IPR000209 GO:0006508|GO:0008236
Gma04g00042 777 Gene3D Peptidase S8/S53 domain 140 634 IPR036852 GO:0004252|GO:0006508
Gma04g00042 777 Gene3D - 350 489 - -
Gma04g00042 777 ProSiteProfiles Serine proteases, subtilase domain profile. 111 621 - -
Gma04g00042 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 771 IPR045051 -
Gma04g00042 777 SUPERFAMILY Subtilisin-like 114 625 IPR036852 GO:0004252|GO:0006508
Gma04g00042 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Gma04g00042 777 PANTHER XYLEM SERINE PROTEINASE 1 33 771 - -
Gma04g00042 777 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Gma04g00042 777 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Gma04g00042 777 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Gma04g00042 777 CDD PA_subtilisin_like 357 482 - -
Gma04g00042 777 Gene3D - 638 774 - -
Gma04g00042 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 33 115 IPR037045 -
Gma04g00042 777 Pfam Peptidase inhibitor I9 57 115 IPR010259 -
Gma04g00042 777 Pfam PA domain 382 467 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00042 Gma-Chr4 373383 375716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00042 13 777 Subtilisin-like Serine Gene Family AT4G34980 71.782 0.0 1138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00042 - - gmx:100792501 1506.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00042 04 373383 375716 Gma04g00042 04 373383 375716 ECH