Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00012 ATGATTAAGCAATTCAGCCTTATTATTATTACTAAACGCACCCCCTCGTTCACCTCCGTTTTTCCGCCAAGCACGTTCAATTGTTTTCCATCGCTTTCTCGGCGGCCAAAGCCCAACGCTGCATTTCGTCCAGAAAATAGCTTGGAAGGTGGCGCTAATCGTGTTATCGCTCGCTCTTGCGTTCTCTCCGCACAATCCGCAGTTTTCAGCGTAAATCTGGGCTCGGAATCGGTGAAGGTGGCGGTGGTGGACCTGAAGCCCGGTCAGATCCCGATCTCGATCGCGATCAACGAGATGTCGAAGCGGGAGTCGCCGGCGCAGGTGTCCCTCCACGAGGGCCACCGCATCCTCGTTGAGGAGGCGGCGGTCCTCGTGGCTCGCTATCCGCAGAAGGTATATTCGCAAATGCACGACCTCGTGGCGAAACCCTACGATTCCGCGAGGAGGATTTTGGACTCAGTGTACTTGTCTTTGGAGGCGAAGGAAGATTCCAGAGGCGGCGTTCCGATAAAGGATGCAGTGATCGCGGTGCCGCCGTATTTGGGGCAAGCCGATCGGAGAGGATTGCTTGTGGCGGCGCAGTTGGCAGGGATTAACGTTCTGTCGTTGATAAACGAGCATTCTGGTGCGGCGCTGCAGTATGGGATCGATAAGGTCTTGTCGGACGAGTCGAGGCACGTGATCTTCTATGACATGGGTTCCAGCAGAACCTATGCAGCGCTTGTCGTATGGGACCGTTGGAACCCAGAGCTTGGTGGTCAGAATATGGAATTGCGATTGGTGGAGTATTTTGCTGATGAGTTCAATGCACAAGTTTCAGGCATTTTCCCAAGGCTATGGCTAAATTGA 849 0.5371 MIKQFSLIIITKRTPSFTSVFPPSTFNCFPSLSRRPKPNAAFRPENSLEGGANRVIARSCVLSAQSAVFSVNLGSESVKVAVVDLKPGQIPISIAINEMSKRESPAQVSLHEGHRILVEEAAVLVARYPQKVYSQMHDLVAKPYDSARRILDSVYLSLEAKEDSRGGVPIKDAVIAVPPYLGQADRRGLLVAAQLAGINVLSLINEHSGAALQYGIDKVLSDESRHVIFYDMGSSRTYAALVVWDRWNPELGGQNMELRLVEYFADEFNAQVSGIFPRLWLN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00012 282 Gene3D - 161 218 - -
Gma04g00012 282 Gene3D Actin; Chain A, domain 4 252 271 - -
Gma04g00012 282 Pfam Hsp70 protein 157 271 IPR013126 GO:0005524|GO:0140662
Gma04g00012 282 PANTHER BNAC07G50110D PROTEIN 61 171 - -
Gma04g00012 282 PANTHER BNAC07G50110D PROTEIN 167 274 - -
Gma04g00012 282 Gene3D - 219 251 - -
Gma04g00012 282 PANTHER HSC70CB, ISOFORM G-RELATED 61 171 - -
Gma04g00012 282 PANTHER HSC70CB, ISOFORM G-RELATED 167 274 - -
Gma04g00012 282 SUPERFAMILY Actin-like ATPase domain 68 217 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00012 Gma-Chr4 123548 124622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00012 92 268 Calmodulin-binding Proteins AT3G12580 22.870 3.84e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00012 K09486 - gmx:100786898 308.531