Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00009 ATGATAGAAGAAGCTCAGAGTAACTTATCATGGAAGCTACCTCCAGCGGTGTTGGCTGTGCTGTCGCCTCCCCATATTCAGATTCATTTCAATTCTTCTTTTTTTTTTTTCTTTCTTCTTCTTCCTCCTATTCGGATTCGCCACATACAGATGGAGGGCTCAAAGGAAAACTGTGTGCCTCGGATTCCGCTCATACCCTCTTCAAATCTTCAAGGTCCAAGAATGAAGCCTCTCCTCCATCACCGGCTGCCTCTCGGCAACATCAGTCAGAATGTTAATATGCCTCATTCTCAAGTCAACAAACTAGATCTTTCCCGCAAGTGTACGGCTCACACAATTCAGCACCACTTCCCTCAAGAAACTAAGAAACAGAACCTGTTGGCCCCGAACCCGAGTTGCAAGTTAGATTGTGATATCGTAGATATTGATGATGACGATGGGGATGGCAGTGACGATGCCGTTCCAGTATTTGTCAAGCACACTGAAGCCATGCTTGATGAAATTGACAAGATAGAGGAAGTTGAAATGGAAGATGTGGAGGAGGAACCTGTTTTGGACATCGATGCCTGTGATAGGAAAGATCCACTTGCAGTGGTTGAGTACATAGATGATATATACAGTTTCTACAAGGACATTGAGAATTCGAGCTGTGTCTCTCCAAATTACATGACTAGTCAACTTGACATTAATGAGAGGATGAGGGCAATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACGTTGTTCCTTACTGTCAATCTCATAGACAGGTTCTTGGAGCGTCAGGCAGTGATCAGAAATAAACTTCAGTTAGTTGGTGTAACAGCTATGCTAATAGCTTGTAAGTATGAGGAGGTCACAGTTCCTACCGTTGAGGATTTTATTCTGATAACAGACAAGGCATATACAAGAAATGAGGTTTTAGATATGGAGAAATTAATGATGAACATCTTGCAATTCAAGCTGTCTATGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGGTCGAGCTTTGCTTGGTAGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTGGCTGCTGCTGCCATTTACACAGCTCAATGTAGTCTGTACCAGTTTAAGCAATGGACTAAGACCACCAAGTGGTACACTGATTACTCAGAAGAGAAGCTTCTCGAATGCTCAAGGCTGATGGTTACTTTCCATCAGAAAGCTGGATCAGGGAAACTCACCGGTGTATATAGAAAGTACAATACATGGAAGTATGGCTGTGCCGCGAAAATAGAACCAGCCCTGTTTCTACTGGATAATTAA 1368 0.4247 MIEEAQSNLSWKLPPAVLAVLSPPHIQIHFNSSFFFFFLLLPPIRIRHIQMEGSKENCVPRIPLIPSSNLQGPRMKPLLHHRLPLGNISQNVNMPHSQVNKLDLSRKCTAHTIQHHFPQETKKQNLLAPNPSCKLDCDIVDIDDDDGDGSDDAVPVFVKHTEAMLDEIDKIEEVEMEDVEEEPVLDIDACDRKDPLAVVEYIDDIYSFYKDIENSSCVSPNYMTSQLDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAVIRNKLQLVGVTAMLIACKYEEVTVPTVEDFILITDKAYTRNEVLDMEKLMMNILQFKLSMPTPYMFMRRFLKAAHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTTKWYTDYSEEKLLECSRLMVTFHQKAGSGKLTGVYRKYNTWKYGCAAKIEPALFLLDN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00009 455 ProSitePatterns Cyclins signature. 234 265 IPR006671 -
Gma04g00009 455 SMART cyclin_7 239 323 IPR013763 -
Gma04g00009 455 SMART cyclin_7 336 418 IPR013763 -
Gma04g00009 455 Pfam Cyclin, N-terminal domain 204 330 IPR006671 -
Gma04g00009 455 PANTHER CYCLIN-B2-3-RELATED 108 450 - -
Gma04g00009 455 SUPERFAMILY Cyclin-like 331 448 IPR036915 -
Gma04g00009 455 Pfam Cyclin, C-terminal domain 332 448 IPR004367 -
Gma04g00009 455 CDD CYCLIN 332 417 IPR013763 -
Gma04g00009 455 Gene3D - 218 330 - -
Gma04g00009 455 CDD CYCLIN 233 322 IPR013763 -
Gma04g00009 455 SUPERFAMILY Cyclin-like 193 329 IPR036915 -
Gma04g00009 455 Gene3D - 204 445 - -
Gma04g00009 455 PANTHER CYCLINS 108 450 IPR039361 -
Gma04g00009 455 SMART Cyclin_C_2 332 449 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00009 Gma-Chr4 101621 106457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00009 104 453 Core Cell Cycle Gene Families AT1G20610 62.079 2.71e-158 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00009 K21777 - gmx:100819848 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00009 04 101621 106457 Gma04g00009 04 101621 106457 ECH
Gma04g00009 04 101621 106457 Gma06g00006 06 89468 96428 GST