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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gma04g00007
ATGGAATATGGTGGGTTGGTGCAGAATAGTGCATATGGGAGCTTCTCAGAAATTTTTGGCCCAGAAACGGATTTCATAGATGAACTGTTTGTGGAAGGATGCTGGGTGGAAACAAGGGTTGGATCGTACCTGAATTGTGGGGGGGAGGCTAATTCTTCAAAGCCAAACACGATGGCTAGCATGGAGACGTCGGCGCAAATAATATTCCAAGAAGAATCATTATCAGACCCGGAAATTAGTTTGATGGTGGGGAAGAGATGGTGGATTGGACCAAGGGAGAATCCGGGGCCATCTTCCTCTGTGAAAGAGAGATTAGTTATTGCAGTCGGGTACTTGAAAGAATACGCCAAGAATTCCAATTTGCTGATTCAGGTATGGGTACCCGAACGGAGGAGATCTGCACGTGCTCAGCCTCAGGATAACTACCCATACGCCGCGCTTCTTAATACAACATCAGCTTTTCAGTTTCAGGAGGATTGGGTTCATGACCAGTGGACTCCCAACATCCGCTTCTTCAGAAGTCACGAGTACCCGCGCCATCTACGACGTCCTGGATCTCTCGCACTTCCTGTCTTTGAGAGTGGCTCCGCCATGTGTCTCGGTGTTGTCGAGATTCTCATGCCCAACAACCCCGACCTTCACGCCCTTCAGAGTGTTGATTTTACAAGCAGTACTTGTCATCAGAACTTTATTCCACCTGCAGCCGTGACCGCGAAGGGTTTTGACGAGTTGTACCAAAGTGCATTAAATGAGATAGTAGAAGTTTTGACGTGTGTATGCAAGGCGCATAACTTGCCTTTAGCTCTCACATGGGCTCCCTGCATCCAACAAGGAAAGAGTGGATGTGGGCATTCAAACGATGAGAATTATGTGTCGATTGTGGATCCTGCTAGTTTTGTGGCGGATGTAGAGGTACTGGGTTTCCTGGAAGCGTGCTCTGAGTGTCACCTTTTGGGGGGGCAAGGAGTAGTTGGGACAGCTTTCACAACCACCAAACCTTGTTTTGCAAATGACATAACTGCCTTCAGCAAGGCGGAATATCCTCTGGCGCACCATGCTAACATGTTTGGCTTGCATGCTGCGGTGGCCATTCCACTCCTGAGTGACTCCGCTGATTTTGTGTTAGAGTTTTTCCTGCCAAAGGATTGCCATGACACCCAAGAGCAGAAGCAGATGCTCAACTCCTTGTCTATGCTAGTACAACAAGCTTGCAGGAGTTTGCATGTTGTCATGGGAAaggaggaggaggaggaggaggaggaggaggaATTAATCGCGTTGCCGCCCGTTGGCAAAGAAATGGAGTCATCATCATCATCATCCTGGATTGCACATATGATGGAGGCCCAACAGAAGGGGAAAGGTGTCTCGGTGTCCTTGGAATACCTCCAAGAGCCAAAACAAGAGTTCAGAGTGACAACCAACTGCAATGAACAGGTTAGTGTTGGTGTTGAGAGTGGGGGAGGAGAAGAATCATATACTGCAGCTTTTGGTGGCCGCCGGGGTGCCAGGAAATCAGCTGGCGACAAGAGACGAACCAAGGCAGAGAAGACTATCAGCTTGCCGGTTCTTCGACAATACTTTGCAGGAAGCCTGAAAGACGCTGCCAAGAGCATTGGCGTATGTCCTACCACTCTTAAAAGGATATGCCGACAACATGGGATCACAAGGTGGCCTTCAAGGAAAATTAAGAAGGTAGGCCACTCCTTAAGAAAACTTCAACTTGTCATCGATTCCGTCCAGGGTGCCGAAGGTGCCATTCAAATTGGCTCCTTCTATACCAGTTTCCCAGAGTTGAGCTCTGCCAATGGTGTTTCTGAATCATCCAACATCAATAATAAGTTTTTTTCTGAATATAACCAAGGAGCTACTACTTTCAAATCCCCAACTTCGCCTTGCAGTCAGACCACTATTCTGATTTCAGAGAACCAACAACCACTTGTACTTGGTGCATCAATCCAGGTCCAAGAGGAAGCAAAACATTTCGCCCACCATCTTGAGCCTCTACCACCAGCTCCCTTGCCCCAATCTAGTACTAGTCTCTGGAACACGGCCGGCACTTTTAGAGTCAAAGCTACTTTTGGGGATGAAAAAATCCGCTTTAGCTTGCAACCAAACTGGGGATTCAGAGATTTGCAGATGGAGATTGCTAGACGTTTCAATCTAAACGAGATTAGCAACATTCAGCTCAAGTATTTGGATGATGCTCGAGAGTGGGTTCTTTTAACATGCGATGCTGATCTTGACGAGTGTAAAGACATAAATACATCATCTCAGAGCCGTACAATTAGACTCTTCCTCTTTCAAGCTTCGCCTCTAAATCATGCAAATGCATTTCGAGGCACCAGCCCCTCCTAG
2358
0.4673
MEYGGLVQNSAYGSFSEIFGPETDFIDELFVEGCWVETRVGSYLNCGGEANSSKPNTMASMETSAQIIFQEESLSDPEISLMVGKRWWIGPRENPGPSSSVKERLVIAVGYLKEYAKNSNLLIQVWVPERRRSARAQPQDNYPYAALLNTTSAFQFQEDWVHDQWTPNIRFFRSHEYPRHLRRPGSLALPVFESGSAMCLGVVEILMPNNPDLHALQSVDFTSSTCHQNFIPPAAVTAKGFDELYQSALNEIVEVLTCVCKAHNLPLALTWAPCIQQGKSGCGHSNDENYVSIVDPASFVADVEVLGFLEACSECHLLGGQGVVGTAFTTTKPCFANDITAFSKAEYPLAHHANMFGLHAAVAIPLLSDSADFVLEFFLPKDCHDTQEQKQMLNSLSMLVQQACRSLHVVMGKEEEEEEEEEELIALPPVGKEMESSSSSSWIAHMMEAQQKGKGVSVSLEYLQEPKQEFRVTTNCNEQVSVGVESGGGEESYTAAFGGRRGARKSAGDKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLRKLQLVIDSVQGAEGAIQIGSFYTSFPELSSANGVSESSNINNKFFSEYNQGATTFKSPTSPCSQTTILISENQQPLVLGASIQVQEEAKHFAHHLEPLPPAPLPQSSTSLWNTAGTFRVKATFGDEKIRFSLQPNWGFRDLQMEIARRFNLNEISNIQLKYLDDAREWVLLTCDADLDECKDINTSSQSRTIRLFLFQASPLNHANAFRGTSPS
785
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gma04g00007
785
Pfam
RWP-RK domain
519
566
IPR003035
-
Gma04g00007
785
Pfam
PB1 domain
687
769
IPR000270
GO:0005515
Gma04g00007
785
SMART
PB1_new
687
770
IPR000270
GO:0005515
Gma04g00007
785
CDD
PB1_NLP
688
769
IPR034891
-
Gma04g00007
785
ProSiteProfiles
RWP-RK domain profile.
505
586
IPR003035
-
Gma04g00007
785
ProSiteProfiles
PB1 domain profile.
687
770
IPR000270
GO:0005515
Gma04g00007
785
PANTHER
PROTEIN NLP2
26
780
-
-
Gma04g00007
785
MobiDBLite
consensus disorder prediction
493
514
-
-
Gma04g00007
785
Gene3D
-
688
770
-
-
Gma04g00007
785
PANTHER
PROTEIN NLP8
26
780
IPR045012
GO:0003700
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gma04g00007
Gma-Chr4
74065
76794
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gma04g00007
6
779
NLP Transcription Factor Family
AT4G35270
41.728
0.0
609
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
RWP-RK
Gma04g00007
PB1
3.3e-16
CL0072
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gma04g00007
-
-
gmx:100787220
1539.63
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gma04g00007
04
74065
76794
Gma04g00007
04
74065
76794
ECH
Gma04g00007
04
74065
76794
Gma06g00004
06
46146
48711
GST
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