Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00002 atggatgggttttcccaaataacaggagttcaatacaagttcattatgtttggagatggacacaagaacccaagctactgtgatcttgtcaacatgattacttctaatgtttttgatgctgccgtagATCAGTTCTTTACCATGGTTACTGATGGAACCAAAAAGCCTCAAGTTTCAGTACCTACACCACCACCACCTTGGAAAATCAATTTGCAGAAATATGCTGAATCCCATGCTCTCGAACTCCATAGTCTTCAATCTATCATAGAAAATAGAGTAAACAGTGATTATAGGTCTCAAAAGAACAAGAGAAGAAGGAAAACTGTGTTTGATAACCAAATTGCAAGAAAAGGGTGCAGAAGAAAGAGGCAGAAACTGGGAATAATTGATAAAGCCCTTGCCAAATCAGGTTTGGAGGAGAATCACCAAAAGAAGCTTCCTCGGTGTGTTCATCGGAGATATGAACTAAAGAAAAACCCAGAGAATGGTTTTTGCACTTCTGGGGATGTAACCAAGAGGCTGAGAACTCATGCTTGGCATGCAAAGTGGTTTGCTATGACCAAGCTTTGGGGTTACCACCTTCCTTTGTGTCTTCAAGGAAGGGGTAAAGGTTCGAGGGCGCTCTTGAAAAAGGCTCAAACAAGAGGTGCTTGTACATGA 660 0.3379 MDGFSQITGVQYKFIMFGDGHKNPSYCDLVNMITSNVFDAAVDQFFTMVTDGTKKPQVSVPTPPPPWKINLQKYAESHALELHSLQSIIENRVNSDYRSQKNKRRRKTVFDNQIARKGCRRKRQKLGIIDKALAKSGLEENHQKKLPRCVHRRYELKKNPENGFCTSGDVTKRLRTHAWHAKWFAMTKLWGYHLPLCLQGRGKGSRALLKKAQTRGACT 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00002 219 PANTHER RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 62 216 IPR039182 GO:0000172|GO:0001682|GO:0005655
Gma04g00002 219 Pfam Ribonucleases P/MRP protein subunit POP1 96 217 IPR009723 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00002 Gma-Chr4 2718 10082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00002 14 110 Ion Channels AT2G32390 29.915 1.18e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00002 K01164 - gmx:100788705 293.123