Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02415 ATGGACCAGTCTTTCATGGTTGCCGAAATTCTTAGAACATTGAATGCTCGTCCAGAACAACAAGGAGGTGGGGATGGAGATATGCAGAGCTTTAGCTACTTGTTGGCAACTCCTCATCTTCTTTCCTGGCCATCTGGGCACTACTTTCACTTTCCCTCCAAATATAACATGGCTGAGGAACTGGATAAACCTTTGCTTGATCCTGAGAATTTCAACCGAGAGGGCATTGATTTGGAACGTATACCATTAGAAGAAGTATTTGAACAGTTGAGAACATCACGAAGAGGACTTTCATCTGATGATGCTGAAGCCCGGATAGAGATATTTGGCCCAAACAAACTTGAAGAGAAGAAAGAGAATAAAATATTGAAATTTCTTAGTTTTATGTGGAATCCTTTGTCATGGGTTATGGAAGCAGCAGCATTGATGGCGATTATCCTTGCTAATGGTGGAGGGGAAGGTCCTGATTGGCAAGACTTTATAGGCATTATATGCCTACTGGTAATAAACTCAACTATAAGTTTTATAGAAGAAAATAACGCAGGAAATGCTGCTGCAGCATTGATGGCTCGTTTAGCTCCTAAAACAAAGGTTCTCAGAGATGGGCAGTGGCAAGAGCAAGATGCAGCTATTTTAGTACCTGGAGATATAATTAGCATAAAGCTGGGAGATATAATTCCAGCTGATGCTCGCTTGCTAGAAGGGGACCCTCTAAAAATTGATCAGGCAAGCCTTTCCCTTACTGGAGAATCTCTACCTGTCACAAAGAGAACTGGTAACGAGGTCTTTTCAGGTTCAACATGTAAACATGGAGAGATTGAAGCTGTAGTGATAGCAACAGGAGTTCACTCATTTTTTGGTAAGGCAGCATACCTGGTTGACAGTACCGAAGTTGTTGGGCATTTTCAGAAGGTCCTTACCTCAATTGGTAACTTCTGCATTTGCTCTATAGCTATAGGGATGATTTTTGAAATAATTATAATGTTCCCAGTGGAGCATCGATCATACAGGGATGGAATAAACAACCTTCTTGTTCTCCTAATTGGAGGAATACCCATCGCCATGCCAACAGTATTATCTGTAACACTTGCAATTGGCTCTCATCGTCTTTCTCAGCAGGGAGCTATCACAAAAAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACTGGAACTCTTACACTGAATCGCCTAACTGTTGATCGAAACCTTATTGAGGTGTTTAACAGAAATATGGACAAGGATACGGTTGTTCTACTTGCAGCCAGAGCAGCTAGACTGGAAAACCAGGATGCTATTGACACTGCCGTAGTTAATATGCTAGCTGATCCAAAGGAGGCACGTGCAAACATCACTGAAGTTCATTTTTTACCATTCAATCCTGTAGATAAGCGTACAGCTATAACATATATCGATTTTGATGGCAATTTTCATAGGGCCAGTAAAGGAGCTCCAGAACAGATTCTAGATTTGTGTCAAGAGAAAGATCAGATTGCCAAGAAAGTGCACACTATAATAGACAAATTTGCTGAAAGGGGATTGCGATCTCTTGCAGTTGCTTATCAGgaaattcctgaaaaatccaaggatagccctggaggtccttggaCTTTTTGTGGTTTGTTGCCTTTGTTTGATCCTCCAAGACATGATAGTGCTGAGACCATCCGAAGAGCACTTAACCTTGGAGTCTGTGTTAAGATGATTACAGGTGATCAATTAGCAATTGCAAAGGAGACAGGCCGAAGACTTGGCATGGGAACAAACATGTACCCTTCTTCATCTTTGTTGGGTCGCGAAAAAGAAGAGCATGAAGCTCTCCCTATTGACGAGCTCGTTGAAATGGCAGATGGCTTTGCTGGTGTATATCCTGAACACAAGTATGAAATAGTGAAAATTTTACAAGAAAAGCAGCATGTTGTCGGAATGACTGGGGATGGAGTAAATGATGCCCCAGCATTGAAGAAAGCAGATATCGGAATAGCTGTGTCAGATGCAACGGATGCTGCAAGAAGTGCTGCTGATCTGGTCCTAACCGAGCCTGGCTTAAGTGTTATTATTAGTGCTGTGTTAACTAGCAGAGCTATATTCCAGAGAATGAAAAATTATACAGTTGAACTTGCATCTAACTTGTCAAACCAAACCCTTTTGCAGCTTGGTTTTGCTCTCCTAGCATTGATTTGGGAATATGATTTTCCACCCTTCATGGTCCTGATCATTGCGATACTAAATGATGGTACCATAATGACCATATCTAAAGACAGAGTGAAGCCATCCCCAACACCTGACAGTTGGAAGCTGCCTGAGATATTTGCAACAGGAATCGTGATTGGCACTTATCTTGCTTTGGTTACTGTCCTGTTCTACTGGGCAATAGTTGAGACCACTTTCTTTGAGAGCCACTTCCATGTAAGTTCCATATCCAGTGACAGCGAGAAAGTATCATCTGCAGTATATCTGCAAGTGAGCATCATTAGCCAGGCTCTAATTTTTGTTACTCGTAGCCGAGGTTGGTCATTTCTAGAGAGACCAGGGGTTCTACTGATGTGTGCATTTGTAATAGCTCAACTGGTGGCGACCATAATTGCTGTGTATGCATATATCAGCTTTGGGAAAATAAGAGGAATTGGATGGAGATGGGCTGGAGTGATATGGCTGTACAGTATAATCTTCTATGTGCCGTTGGACATAATCAAGTTCACAGTGCGGTATGGCTTGAGTGGAGAAGCCTGGAAACTGATATTTGAAAGAAAGACAGCGTTTACATATAAGAAAGACTACGGAAAAGAAGAAAGGGCAGCAAAGGAGGAGAATGGAAGGGGGTCTTCTTTGATAGCTGAAAAGGCCAGAAGACGTGCTGAAATAGCCAGGCTGGGAGAAATACACAGTCTCAGAGGACATGTTCAATCTGTTCTCAGACTCAAAAACTTTGACCAGAATCTCATCCAATCCGCTCATACAGTCTAA 2988 0.4147 MDQSFMVAEILRTLNARPEQQGGGDGDMQSFSYLLATPHLLSWPSGHYFHFPSKYNMAEELDKPLLDPENFNREGIDLERIPLEEVFEQLRTSRRGLSSDDAEARIEIFGPNKLEEKKENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFIGIICLLVINSTISFIEENNAGNAAAALMARLAPKTKVLRDGQWQEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQASLSLTGESLPVTKRTGNEVFSGSTCKHGEIEAVVIATGVHSFFGKAAYLVDSTEVVGHFQKVLTSIGNFCICSIAIGMIFEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDTVVLLAARAARLENQDAIDTAVVNMLADPKEARANITEVHFLPFNPVDKRTAITYIDFDGNFHRASKGAPEQILDLCQEKDQIAKKVHTIIDKFAERGLRSLAVAYQEIPEKSKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGREKEEHEALPIDELVEMADGFAGVYPEHKYEIVKILQEKQHVVGMTGDGVNDAPALKKADIGIAVSDATDAARSAADLVLTEPGLSVIISAVLTSRAIFQRMKNYTVELASNLSNQTLLQLGFALLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALVTVLFYWAIVETTFFESHFHVSSISSDSEKVSSAVYLQVSIISQALIFVTRSRGWSFLERPGVLLMCAFVIAQLVATIIAVYAYISFGKIRGIGWRWAGVIWLYSIIFYVPLDIIKFTVRYGLSGEAWKLIFERKTAFTYKKDYGKEERAAKEENGRGSSLIAEKARRRAEIARLGEIHSLRGHVQSVLRLKNFDQNLIQSAHTV 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02415 995 Gene3D - 194 280 - -
Gma03g02415 995 SUPERFAMILY Calcium ATPase, transmembrane domain M 76 911 IPR023298 -
Gma03g02415 995 CDD P-type_ATPase_H 96 907 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma03g02415 995 Gene3D - 156 881 - -
Gma03g02415 995 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 57 975 - -
Gma03g02415 995 SUPERFAMILY Calcium ATPase, transduction domain A 194 292 IPR008250 -
Gma03g02415 995 Pfam Cation transporter/ATPase, N-terminus 81 143 IPR004014 -
Gma03g02415 995 Gene3D - 947 995 - -
Gma03g02415 995 PRINTS H+-transporting ATPase (proton pump) signature 509 527 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g02415 995 PRINTS H+-transporting ATPase (proton pump) signature 623 639 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g02415 995 PRINTS H+-transporting ATPase (proton pump) signature 651 667 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g02415 995 PRINTS H+-transporting ATPase (proton pump) signature 682 707 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g02415 995 PRINTS H+-transporting ATPase (proton pump) signature 826 847 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g02415 995 ProSitePatterns E1-E2 ATPases phosphorylation site. 395 401 IPR018303 -
Gma03g02415 995 Gene3D - 405 552 IPR023299 GO:0000166
Gma03g02415 995 PANTHER CALCIUM-TRANSPORTING ATPASE 57 975 - -
Gma03g02415 995 SMART Cation_ATPase_N_a_2 77 149 IPR004014 -
Gma03g02415 995 Pfam haloacid dehalogenase-like hydrolase 389 665 - -
Gma03g02415 995 SFLD p-type atpase 375 702 IPR044492 -
Gma03g02415 995 SFLD Haloacid Dehalogenase 375 702 - -
Gma03g02415 995 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 626 734 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g02415 995 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 163 414 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g02415 995 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 96 872 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma03g02415 995 PRINTS P-type cation-transporting ATPase superfamily signature 569 579 - -
Gma03g02415 995 PRINTS P-type cation-transporting ATPase superfamily signature 393 407 - -
Gma03g02415 995 PRINTS P-type cation-transporting ATPase superfamily signature 651 670 - -
Gma03g02415 995 PRINTS P-type cation-transporting ATPase superfamily signature 547 558 - -
Gma03g02415 995 PRINTS P-type cation-transporting ATPase superfamily signature 243 257 - -
Gma03g02415 995 PRINTS P-type cation-transporting ATPase superfamily signature 674 686 - -
Gma03g02415 995 SUPERFAMILY HAD-like 389 698 IPR036412 -
Gma03g02415 995 Gene3D - 390 688 IPR023214 -
Gma03g02415 995 Pfam E1-E2 ATPase 192 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02415 Gma-Chr3 49211640 49221045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02415 57 995 Primary Pumps ATPases AT1G17260 79.307 0.0 1509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02415 K01535 - gmx:100795836 1712.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02415 03 49211640 49221045 Gma03g02415 03 49211640 49221045 ECH