Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02414 ATGGTCGCTGCTATATGCTATATGCTATACGCTTTGCAATCCCCAACATCTCAAACCCATATGCTAACATTGAGGAAGTATCCTAAAGACTCCCTTTTTCCCTTCTGGGGATTCGTTCTAATGACACAGGGAACTCGACCCTTTTCCATCTTCATGGTTTCCAAGTTAATGGTCTTTGTCTTAATACTGTTCCTTCTGTCTGGATTCCTTGTTCTTGTTCAAGCCTCCTCGTGTAACCAACTGGATAGAGACTCGCTCCTCTCCTTCTCCAGGAATATATCCTCTCCGTCCCCTCTCAATTGGTCTGCTTCTTCTGTTGATTGCTGTTCTTGGGAAGGCATTGTGTGTGATGAGGATCTCAGAGTCATACATCTATTGCTACCATCCAGGGCTCTCTCTGGCTTCCTCTCCCCATCCCTCACAAACCTCACTGCTCTCTCCCGCCTTAATCTCTCCCATAATCGCTTATCTGGTAATCTTCCCAACCATTTTTTCTCACTTCTTAATCACCTGCAGATTCTTGATTTGAGCTTCAATCTTTTCTCTGGCGAATTGCCACCCTTTGTTGCTAATATCAGTGGCAATACTATCCAGGAGCTGGATATGTCTAGTAATTTATTCCACGGAACACTCCCACCTTCTCTCCTTCAGCACCTGGCAGATGCCGGTGCTGGAGGGAGTTTGACTTCTTTTAATGTTAGTAACAATAGCTTCACAGGTCATATTCCCACTTCTCTCTGCAGTAACCACAGTAGCTCGTCTTCTCTCAGATTCTTGGATTATTCCTCCAATGATTTCATAGGCACGATTCAGCCTGGACTAGGAGCATGTTCCAATCTGGAGAGATTTCGAGCAGGTTCCAATTCACTATCTGGGCCCCTTCCTGGTGATATTTTTAATGCTGTTGCTCTCACAGAAATCTCCTTGCCCCTCAATAAACTCAATGGAACCATTGGTGAGGGCATTGTTAACCTTGCCAACCTCACAGTTTTGGAGCTCTACTCCAATAATTTCACCGGGCCCATTCCCTCGGATATTGGTAAGCTCTCCAAATTGGAACGTTTACTCCTTCATGCCAACAATATAACTGGTACTTTGCCCACATCTCTGATGGACTGTGCCAATCTTGTCATGTTGGATGTAAGGCTTAACTTGTTGGAGGGAGACCTCTCAGCATTAAATTTCTCCGGACTCCTCAGACTCACAGCACTTGACCTTGGCAACAATAGTTTCACTGGTATTTTACCACCAACCCTTTATGCTTGTAAGTCACTTAAAGCAGTAAGGCTAGCATCTAATCATTTTGAGGGACAGATCTCACCTGACATACTTGGACTTCAGTCTCTGGCTTTCCTTTCAATTTCTACCAACCACCTGAGTAATGTCACTGGGGCTCTGAAGTTACTCATGGAACTCAAGAACCTCAGTACCCTTATGCTCTCCCAGAATTTTTTCAATGAAATGATGCCAGATGATGCAAACATAACAAATCCAGATGGATTCCAAAAGATCCAAGTTCTAGCATTGGGTGGTTGTAATTTCACAGGCCAAATACCACGCTGGCTTGTTAATCTGAAGAAGCTTGAGGTCTTGGATTTGTCTTATAATCAAATTAGTGGTTCAATTCCTCCTTGGTTGAACACACTTCCTGAGCTTTTCTACATAGACTTGTCTTTTAACCGCCTCACAGGAATATTTCCAACTGAGCTCACAAGGCTTCCAGCACTAACATCACAACAGGCATATGATGAAGTAGAAAGGACTTACCTGGAGTTACCCCTCTTTGCTAATGCCAACAATGTTTCCCAAATGCAATATAATCAGATTTCCAACCTACCACCAGCAATATATCTGGGAAACAATAGCCTCAATGGCAGTATCCCTATAGAGATTGGCAAACTGAAAGTCCTTCATCAGCTGGACCTTAGTAACAACAAATTCTCTGGCAATATCCCAGCAGAAATTTCTAACTTGATTAACTTAGAGAAACTATACCTCTCAGGAAACCAACTTTCTGGTGAGATTCCTGTTTCACTCAAAAGCTTGCATTTTTTGTCTGCTTTCAGTGTAGCATACAATAATCTTCAAGGACCGATACCAACTGGTGGTCAATTTGATACTTTCTCCTCTTCCAGCTTTGAAGGAAACCTACAGTTGTGTGGTTCAGTTGTTCAGCGTTCTTGTCTTCCTCAACAGGGTACTACTGCACGTGGTCACAGATCAAACAAAAAATTGATAATTGGATTTTCCATTGCAGCCTGTTTTGGCACTGTTTCCTTCATTTCAGTGTTGATAGTGTGGATAATATCCAAGAGAAGGATCAATCCAGGTGGAGACACTGACAAGGTTGAACTGGAGTCAATTTCTGTCAGCTCTTACAGTGGAGTTCATCCTGAGGTTGACAAAGAGGCTAGCCTAGTGGTATTGTTCCCAAATAAAACAAATGAAATCAAGGACCTTACCATATTTGAAATATTAAAGGCCACTGAAAATTTCAGTCAGGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACGTTACCAAATGGAACTACAGTGGCCATCAAGAAACTTTCAGGAGATTTGGGTCTTATGGAAAGGGAATTTAAAGCAGAGatatgtgaaccacatatagtgcatcgtgatataaagtcaagtacattaggttacatacccccagagtatggacaagcatgggtagcaactctgagaggagatgtctacagctttggggttgtcatgcttgagctgctcagtgggaggaggcccgtcgatgtaagcaagcctaaaatgtcaagggagttggttgcctgggttCAACAAATGAGGAGTGAAGGAAAACAAGATCAAGTCTTTGATCCTCTTCTGAGAGGGAAGGGCTTCGAAGAAGAGATGCAGCAGGTTCTTGATGCAGCATGCATGTGTGTCAACCAGAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGAATGGCTGAAGAATGTGGGGTCATCCAAACCGCAAATGAATAAAGACTAG 3033 0.3986 MVAAICYMLYALQSPTSQTHMLTLRKYPKDSLFPFWGFVLMTQGTRPFSIFMVSKLMVFVLILFLLSGFLVLVQASSCNQLDRDSLLSFSRNISSPSPLNWSASSVDCCSWEGIVCDEDLRVIHLLLPSRALSGFLSPSLTNLTALSRLNLSHNRLSGNLPNHFFSLLNHLQILDLSFNLFSGELPPFVANISGNTIQELDMSSNLFHGTLPPSLLQHLADAGAGGSLTSFNVSNNSFTGHIPTSLCSNHSSSSSLRFLDYSSNDFIGTIQPGLGACSNLERFRAGSNSLSGPLPGDIFNAVALTEISLPLNKLNGTIGEGIVNLANLTVLELYSNNFTGPIPSDIGKLSKLERLLLHANNITGTLPTSLMDCANLVMLDVRLNLLEGDLSALNFSGLLRLTALDLGNNSFTGILPPTLYACKSLKAVRLASNHFEGQISPDILGLQSLAFLSISTNHLSNVTGALKLLMELKNLSTLMLSQNFFNEMMPDDANITNPDGFQKIQVLALGGCNFTGQIPRWLVNLKKLEVLDLSYNQISGSIPPWLNTLPELFYIDLSFNRLTGIFPTELTRLPALTSQQAYDEVERTYLELPLFANANNVSQMQYNQISNLPPAIYLGNNSLNGSIPIEIGKLKVLHQLDLSNNKFSGNIPAEISNLINLEKLYLSGNQLSGEIPVSLKSLHFLSAFSVAYNNLQGPIPTGGQFDTFSSSSFEGNLQLCGSVVQRSCLPQQGTTARGHRSNKKLIIGFSIAACFGTVSFISVLIVWIISKRRINPGGDTDKVELESISVSSYSGVHPEVDKEASLVVLFPNKTNEIKDLTIFEILKATENFSQANIIGCGGFGLVYKATLPNGTTVAIKKLSGDLGLMEREFKAEICEPHIVHRDIKSSTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLSGRRPVDVSKPKMSRELVAWVQQMRSEGKQDQVFDPLLRGKGFEEEMQQVLDAACMCVNQNPFKRPSIREVVEWLKNVGSSKPQMNKD 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02414 1010 SUPERFAMILY Protein kinase-like (PK-like) 816 1001 IPR011009 -
Gma03g02414 1010 SUPERFAMILY L domain-like 258 716 - -
Gma03g02414 1010 PRINTS Leucine-rich repeat signature 146 159 - -
Gma03g02414 1010 PRINTS Leucine-rich repeat signature 525 538 - -
Gma03g02414 1010 Pfam Leucine rich repeat N-terminal domain 82 117 IPR013210 -
Gma03g02414 1010 PANTHER OS02G0155400 PROTEIN 59 877 - -
Gma03g02414 1010 Gene3D Ribonuclease Inhibitor 300 395 IPR032675 -
Gma03g02414 1010 Pfam Leucine Rich Repeat 660 682 IPR001611 GO:0005515
Gma03g02414 1010 Pfam Leucine Rich Repeat 400 420 IPR001611 GO:0005515
Gma03g02414 1010 Pfam Protein tyrosine and serine/threonine kinase 883 996 IPR001245 GO:0004672|GO:0006468
Gma03g02414 1010 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 59 877 - -
Gma03g02414 1010 ProSiteProfiles Leucine-rich repeat profile. 527 550 IPR001611 GO:0005515
Gma03g02414 1010 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 891 998 - -
Gma03g02414 1010 SMART LRR_typ_2 472 494 IPR003591 -
Gma03g02414 1010 SMART LRR_typ_2 658 682 IPR003591 -
Gma03g02414 1010 SMART LRR_typ_2 398 422 IPR003591 -
Gma03g02414 1010 SMART LRR_typ_2 143 167 IPR003591 -
Gma03g02414 1010 SMART LRR_typ_2 446 468 IPR003591 -
Gma03g02414 1010 SMART LRR_typ_2 168 191 IPR003591 -
Gma03g02414 1010 SMART LRR_typ_2 525 549 IPR003591 -
Gma03g02414 1010 SMART LRR_typ_2 349 373 IPR003591 -
Gma03g02414 1010 SMART LRR_typ_2 634 657 IPR003591 -
Gma03g02414 1010 SUPERFAMILY L domain-like 101 339 - -
Gma03g02414 1010 Gene3D Ribonuclease Inhibitor 396 735 IPR032675 -
Gma03g02414 1010 ProSitePatterns Protein kinases ATP-binding region signature. 838 861 IPR017441 GO:0005524
Gma03g02414 1010 ProSiteProfiles Leucine-rich repeat profile. 660 682 IPR001611 GO:0005515
Gma03g02414 1010 PANTHER OS02G0155400 PROTEIN 891 998 - -
Gma03g02414 1010 Gene3D Phosphorylase Kinase; domain 1 796 888 - -
Gma03g02414 1010 Gene3D Transferase(Phosphotransferase) domain 1 889 1010 - -
Gma03g02414 1010 SMART serkin_6 832 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02414 1010 Gene3D Ribonuclease Inhibitor 223 299 IPR032675 -
Gma03g02414 1010 Gene3D Ribonuclease Inhibitor 79 222 IPR032675 -
Gma03g02414 1010 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02414 Gma-Chr3 49199250 49202600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02414 40 766 Miscellaneous Gene Families AT1G17240 49.661 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Gma03g02414 PK_Tyr_Ser-Thr 9.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02414 - - gmx:100782574 1684.85