Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02408 ATGTCACCTATTGTCCTCCTCACTTTTCTTGTGCTTCTTCTGTGCTTCCCATTTTCTTGTTACTCTTGCAATGAAACATGCGGGGACCTCCATGTTCCCTTTCCATTCTATGTCAACACTTCATGTGAGTCAATTTCCAGTGCCTTCCATCTCTCGTGCTCAAATTCCTCTGCCCTTTTACTCAGAATTGGGTCAGTGAGCTACACAGTGTTGGAATTCTTCCCAGATGGTGTGCTGGTTGACTTTCCAGGCTCATCATCCTGTAGACTGTACAATGACTTGAACTCTTTTGGCAGAAACTTTGCAGGGAATAATAAGGACATGTTTGGAGTGTCGGTTGACAATGTTATTGGGCTCTATGACTGTGAGGATTCTTCTCTGTGCAAAGCAGATTGTGAAACCATTGACATGCCTGGATGTGATGGAAAGGGTGGAGGCTCCCTTGCCTGCTGCTATCCACTCTCTGACCATACCATATGGCATGCTGGAGATGGCTTTTCGGTGTTTTCTCAGTTTGGATGCAGAGGGGTTTCTAGTTGGGCTGTTCTGCGAGGCTCAACTTGGGGAAAACGTGGTGTCAAGTTGGAATGGGCACTTCCCAGGAACTCCTCCTCTACTCATGTTTGTGCTACGAATGCTAACATGGCCAATGCTACGGCGGTTGAAGGAGGCGTCAGATGTGTCTGCCAGAATGGATATGTTGGTGATGGTTTTGCTAATGGAACTGGATGTTTGCAGGCCTGCATAAAGGATGGAAAGGAAGCATATGGAAGTGACTGCTATATCAAAAGACATGATCAAAGGAAATTTGTTATGATTGCCGGAATCATTGGCCCAGTTCTCATTGTTGCCTCCCTGGTTGTACTATTTTATCTTCTTAAAAGGCCAACAAAACCAGGGATGTTTGACACAGAGCAGGCTTACTATCAAAACATTACAATCCCCAAAGCTTGTAAAACTCGGTTATTCAGCCTCCATGAGCTAGAAGAAGCCACTAAGGGTTTTGAAGAGGGTCAGAAACTAATGCATGACAATAATGGGACAATTTTCGCTGGAGTTTTAGGGGATGGATCTCACATAGCTGTCCACAAGTTAAAGTGTGAGAAGAATGACTTAATCCAAGTCCTGTCACAAATCGAGGTTCTATCTTCTGTTGTGCATAGAAACATGGCCCGAATTCTTGGATGCTGTATTGAATCTGGCAACACTCTAGTAGTTTATGAGTATACTTCCAATGGTACTCTGGAGGAACATTTACATCAAAGCAAAGGACAACAACTTCGTTTAGATTGGTATAGTAGATTGACTATTGCTGCACAAACAGCTAGTGTTCTAGCATTCTTACACTACGAGAAAAATCCTCCCATACTTCACCATAACCTTAAATCTGCCTGCATCTTCCTAGATGATGATTATTCTGTCAAGATTGCAGGATTTGGCCTGATCAACTCCAATTTTTACTATGGTTCTAACTTACAAAAGAACTGTGAAGGATTTGGCATCTGCAAAAATGATGTTTATGACATGGGTGTGTTGCTTCTTGAGATTATCTCAGGCTCAAATCAGTTGGATTCACCAACGTTGGCCTTACAGCATATAAGGGCTGGAAAATTTGAGGAAATTATGGACCCATTTCTTTGCTATGATGAACAGCCACATTATCGGCAAGAGCAAATGCAAATAATTGCAGATCTTGCTACAAGGTGCCTGTTATTTGGTGTAGATGGAAGGCTAGGAATGATTGATGTTGTGAGGGAGTTAGTACACATGACTAAAGAAAGTCTTGATGGAGGAATTATGAAAGGACCTGCACTGGAGGAGACATTCTCAAATTCAAGCCTTCTTCAGATGATATCAATGTCTCCTGATTCTATGAATGTCCCTTGA 1887 0.4261 MSPIVLLTFLVLLLCFPFSCYSCNETCGDLHVPFPFYVNTSCESISSAFHLSCSNSSALLLRIGSVSYTVLEFFPDGVLVDFPGSSSCRLYNDLNSFGRNFAGNNKDMFGVSVDNVIGLYDCEDSSLCKADCETIDMPGCDGKGGGSLACCYPLSDHTIWHAGDGFSVFSQFGCRGVSSWAVLRGSTWGKRGVKLEWALPRNSSSTHVCATNANMANATAVEGGVRCVCQNGYVGDGFANGTGCLQACIKDGKEAYGSDCYIKRHDQRKFVMIAGIIGPVLIVASLVVLFYLLKRPTKPGMFDTEQAYYQNITIPKACKTRLFSLHELEEATKGFEEGQKLMHDNNGTIFAGVLGDGSHIAVHKLKCEKNDLIQVLSQIEVLSSVVHRNMARILGCCIESGNTLVVYEYTSNGTLEEHLHQSKGQQLRLDWYSRLTIAAQTASVLAFLHYEKNPPILHHNLKSACIFLDDDYSVKIAGFGLINSNFYYGSNLQKNCEGFGICKNDVYDMGVLLLEIISGSNQLDSPTLALQHIRAGKFEEIMDPFLCYDEQPHYRQEQMQIIADLATRCLLFGVDGRLGMIDVVRELVHMTKESLDGGIMKGPALEETFSNSSLLQMISMSPDSMNVP 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02408 628 PANTHER OS10G0351500 PROTEIN 32 623 - -
Gma03g02408 628 Pfam Wall-associated receptor kinase galacturonan-binding 23 73 IPR025287 GO:0030247
Gma03g02408 628 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 32 623 IPR045274 GO:0007166
Gma03g02408 628 ProSiteProfiles Protein kinase domain profile. 335 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02408 628 Gene3D Transferase(Phosphotransferase) domain 1 410 597 - -
Gma03g02408 628 Gene3D Phosphorylase Kinase; domain 1 302 409 - -
Gma03g02408 628 SUPERFAMILY Protein kinase-like (PK-like) 318 587 IPR011009 -
Gma03g02408 628 Pfam Protein tyrosine and serine/threonine kinase 338 485 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02408 Gma-Chr3 49131811 49134321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02408 23 587 Receptor kinase-like Gene Family AT2G23450 30.116 2.05e-60 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Gma03g02408 PK_Tyr_Ser-Thr 3.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02408 - - gmx:100779880 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02408 03 49131811 49134321 Gma03g02408 03 49131811 49134321 ECH