Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02404 ATGTCAAAGGACAAAGTTTCCGGTGATCCAAGACGCGCAGTGTGCACAGGCATCACCATCTTCCTCCTCTTAGCCGGCGTCACTCTCCTAGTCCTCTGGCTGGTCTACCGTCCCCACAAGCCGCGCTTCACAGTAATCGGCGCCGCCGTCTACGACCTAAACACCACCACCCCACCGCTGATGTCGACCACCGTGCAGTTCTCCGTCCTCATAAAGAACCCGAACAGGCGTGTCTCCATTTACTACGACAGGTTCTCCGCCTTTGTCTCGTACAGGAACCAGGCCATAACGCCGCAGGTTCTGCTGCCGCCTCTGCACCAGGAGAAGCGAAGCTCGGTGTCGGTGTCGCCGGTGATGGGAGGCACGGCGCTTCCGGTGTCGGTGGAGGTGTCTGACGGGCTGGCGGTGGACGAGGCTTATGGGTTGGTGGGTCTGAGGCTGATATTTGAGGGCAGAGTGAGGTGGAAGGCCGGGGCCATCAAAACTGCGCACTATGGACTGTACGTTAAGTGCGATGTTTTGATGGGTTTGAAGAAAGGGTTGGTGGGTCAAGTTCCTCTCCTGGGAGTTACACCCTGCCATGTCCATCTATGA 594 0.5774 MSKDKVSGDPRRAVCTGITIFLLLAGVTLLVLWLVYRPHKPRFTVIGAAVYDLNTTTPPLMSTTVQFSVLIKNPNRRVSIYYDRFSAFVSYRNQAITPQVLLPPLHQEKRSSVSVSPVMGGTALPVSVEVSDGLAVDEAYGLVGLRLIFEGRVRWKAGAIKTAHYGLYVKCDVLMGLKKGLVGQVPLLGVTPCHVHL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02404 197 PANTHER OS05G0367900 PROTEIN 9 195 IPR044839 GO:0098542
Gma03g02404 197 Pfam Late embryogenesis abundant protein 69 170 IPR004864 -
Gma03g02404 197 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 9 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02404 Gma-Chr3 49105497 49106416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02404 11 173 EF-hand Containing Proteins AT5G21130 21.687 6.62e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02404 - - gmx:100792483 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02404 03 49105497 49106416 Gma03g02404 03 49105497 49106416 ECH
Gma07g00464 07 4263307 4272881 Gma03g02404 03 49105497 49106416 ECH