Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02403 ATGGGTCTAGTGGCGGCTGACAAGGGTTCGATGCAGACCCAAGAGGAACAGAGCGACAATGCCTCCGCTGTTCAGTGGGAACGCTTTCTGCCTCGGATGGTGCTTCGGGTCTTGCTTGTCGAAGCTGATGATTCTACTCGACAGATCATTTCTGCACTTCTCCATAAATGCAGTTACAAAGTTGTCGCATTTTGTGACGGCTTAAAGGCATGGGAGACATTGAAGAACAAACCATCTGACATAGATCTCATATTAACAGAAGTGGATTTGCCATCAATATCTGGATTCTCACTTCTTACTTTAATCATGGAGCATGACATTTGCAAAAACATTCCCGTCATAATGATGTCTTCTCATGATTCCGTTAGCATGGTACTCAAATGCATGTTAAAAGGTGCAGCTGATTTTCTTATAAAACCTGTTCGCAGGAATGAGCTAAGAAACTTGTGGCAGCATGTATGGAGAAGGCACGCCATTGAAATTGGTTTTGCTGCAGAAAACCATGCTGCAAGCAATGACTCTAGTGGTTCTGTGGCTTCTACAGCAAAAAATGGTGAATGCAGCGAGAAAACAAGTGAGGCTCAAGATATATCGCAGCTGAAGAGGTCTTCAAATTTGAGCAATATTGACACGGTGAAGCATGAAAATTCTACCAAATGTGAAAGGGAATCAGATAAGCATAATGATGAAGCTGGAGAGAAATCACTGTTTGTATCAGAAGATTCAAGGTGCAACAAAACTTTTAAACCAACAGGTTTAAGGCTAGGTCAAGGCTATGAATGCTGTGAAACGAGAAATCAAGATGTAGTTCTAAAAATAGAGTTGATCAAATCCAATCCTGAAATTAATACAGATATTCATGGATGCAGTGATGAACTGGTAGATCCTTATACTGGGGCCATTGACTTGATTGCTACATTCAAGAATCTTCCAAAGAGCACTGATGAAAAATGTAGTTTCAGTAGTGGTAACACTGCCAAGTTTGATTTTGATACACAATTGGAACTTTCTTTAAGAAGAAGAGATTTTCCTGGAAGCTCATGTAAAGCTGCATCTGAGGAAAGGCAATTATTGAACCATTCAAATGCTTCTGCCTTTTCTAGGTATAGTAGTAGTAAGTTGTTGCAGCCCCTTTTTCCAACACCATCAACTATCTCTGCTAAATTAACAAATTCCAGTCTGAGTTCTCATGAATCCCATAAATTCTCAGAAAATGCATCTACTTCTCATCAATATGGTGGAAAAAATCAAAATCAGGAGAAAATTATCACTCCAGTCATTGGTCAGTCTGGACAAGTTGATCCAAAATTACCAAACAGTCAACTTGGATATTTTCCTGCTACAGGGGTTACTTCTGATCACAAGTCTACAGGAAATGGAAATGTCTTCCCTTCTATGCTTTATGCAGAATCAGGTGTCCATCCCATATGGACTCCAAAATCAGTGTGCCAGAAAGAAAGTTCTCCATTTCCCACAATCACTTCATCCCAGTCCAATCCTCAAAGTCACAACTCAGAATGTCATCTCTGGTCGGAAGATTCAACCCATGCTTCTGATAAAAATTTAAATGATCAAATTAATTTGGATTGTGAGACACATGACTCTCCTGATGCTAGTCAGAGTGCTGGTACTAGTTTTTTCCACGACACAGCAAATCATAATAGTAGCGGTGTATACAGAAGCATGGGCTGCAGAAGTGATGGAAATGCTACTTCAGCTAAGGTAGCCAAGGAGAGCCATGGAAGTTTTATTGATAGTGGTCACTGCAGTTATGATGGATTCATAGGGACAGATTCTCATCGCACAAGCCACCGAGAAGCAGCTCTGACAAAGTTTCGACTGAAGCGGAAAGACAGATGCTATGAGAAAAAGGTGCGATATCAAAGCCGGAAGAGATTGGCAGAGCAGCGCCCCCGGGTGAAAGGGCAGTTTGTTCGCCAAGTACAAGATGATCATCCAGTAGCAGATGTGGGTGGTGGTTCCTGA 1986 0.4134 MGLVAADKGSMQTQEEQSDNASAVQWERFLPRMVLRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETLKNKPSDIDLILTEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHAIEIGFAAENHAASNDSSGSVASTAKNGECSEKTSEAQDISQLKRSSNLSNIDTVKHENSTKCERESDKHNDEAGEKSLFVSEDSRCNKTFKPTGLRLGQGYECCETRNQDVVLKIELIKSNPEINTDIHGCSDELVDPYTGAIDLIATFKNLPKSTDEKCSFSSGNTAKFDFDTQLELSLRRRDFPGSSCKAASEERQLLNHSNASAFSRYSSSKLLQPLFPTPSTISAKLTNSSLSSHESHKFSENASTSHQYGGKNQNQEKIITPVIGQSGQVDPKLPNSQLGYFPATGVTSDHKSTGNGNVFPSMLYAESGVHPIWTPKSVCQKESSPFPTITSSQSNPQSHNSECHLWSEDSTHASDKNLNDQINLDCETHDSPDASQSAGTSFFHDTANHNSSGVYRSMGCRSDGNATSAKVAKESHGSFIDSGHCSYDGFIGTDSHRTSHREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQVQDDHPVADVGGGS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02403 661 MobiDBLite consensus disorder prediction 390 416 - -
Gma03g02403 661 MobiDBLite consensus disorder prediction 632 661 - -
Gma03g02403 661 MobiDBLite consensus disorder prediction 170 234 - -
Gma03g02403 661 ProSiteProfiles CCT domain profile. 605 647 IPR010402 GO:0005515
Gma03g02403 661 CDD psREC_PRR 37 140 - -
Gma03g02403 661 MobiDBLite consensus disorder prediction 484 507 - -
Gma03g02403 661 ProSiteProfiles Response regulatory domain profile. 36 154 IPR001789 GO:0000160
Gma03g02403 661 Gene3D - 33 238 - -
Gma03g02403 661 SMART REC_2 35 150 IPR001789 GO:0000160
Gma03g02403 661 MobiDBLite consensus disorder prediction 170 213 - -
Gma03g02403 661 Pfam Response regulator receiver domain 37 148 IPR001789 GO:0000160
Gma03g02403 661 PANTHER PRR RESPONSE REGULATOR 22 191 - -
Gma03g02403 661 PANTHER PRR RESPONSE REGULATOR 193 644 - -
Gma03g02403 661 MobiDBLite consensus disorder prediction 214 234 - -
Gma03g02403 661 SUPERFAMILY CheY-like 35 161 IPR011006 -
Gma03g02403 661 Pfam CCT motif 605 647 IPR010402 GO:0005515
Gma03g02403 661 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 191 IPR045279 GO:0009736
Gma03g02403 661 PANTHER TWO-COMPONENT RESPONSE REGULATOR 193 644 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02403 Gma-Chr3 49099161 49103468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02403 604 649 Response Regulator Gene Family AT5G24470 89.130 1.79e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gma03g02403 Response_reg 1.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02403 K12130 - gmx:100779346 1307.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02403 03 49099161 49103468 Gma03g02403 03 49099161 49103468 ECH
Gma07g00465 07 4276273 4281521 Gma03g02403 03 49099161 49103468 ECH