Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02392 ATGAGCAGCATGAAGGTAGCGAAAGGGCGTATCCTGGTTGGTAAATACGAGTTGGGAAAAACAATTGGAGAGGGAAGCTTTGCCAAGGTGAAGTTCGCCAGGAACGTCCAGAACGGTAACTATGTCGCCATCAAAATCCTCGACCGTAAACATGTCCTCCGCCTCAACATGATGGAACAGCTCATGAAAGAAATATCAACCATGAAGTTAATCAATCACCCCAACGTTGTTAGAATACTTGAGGTGTTGGCAAGCAAAACAAAGATTTACATTGTTCTGGAGTTTGTTGATGGGGGAGAACTATTTGACAAAATTGCTGCAAATGGAAGACTTAAAGAAGATGAAGCAAGAAATTATTTCCAACAGCTTATTAATGCTGTTGATTACTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCTGAGAATCTTCTAGACTCAAATGGTGTCCTTAAAGTTTCAGATTTTGGTTTGAGTACATACTCACAGAAAGAGGATGAACTGCTCCACACTGCATGTGGAACCCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATTTGGTCTTGTGGAGTCATTCTCTTTGTACTTATGGCTGGGTACTTGCCTTTTGATGAACCAACTCATATGGCTCTGTACAAAAAAATTGGCAGGGCAGAATTCTCTTGTCCATCATGGTTTTCGCCACAGGCAAAGAAATTGCTAAAACACATTCTTGACCCAAACCCTCTAACGAGGATAAAAATTCCTGAGCTCTTAGAAGATGAATGGTTCAAAAAAGGATACAAGCCAACATCCTTCACTGAGGAAGAGGATCTAAATGTAGATGATGTAGTCGTTGCTTTCAATGAGTCTAATGAAAATCTAGTGACAGAGAGAAAAGAGAAACCCGTCTCCATGAATGCTTTTGAGCTCATTTGTAGGTCACAAAgTTTCAATCTTGACAGTTTGTTTGAGAAGCAAACGGGTCAAGTAAAGCAAGAAACAAGTTTTACTTCACAGTGCCCTGCAAATGAAATTATGTTTAAAATCGAGGAAGCAGCCAAGCCACTGGGCTTTAATGTATACAAGCGAAATTATAAGATGAAGTTGCAAGGTGACAAGAGTGGGAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTTGAAGTGGCGCCATCCGTGCATATGGTGGAGCTGCGAAAGACAGGGGGTGATACATTAGAGTTTCATAAGTTCTACAAAATATTCTCATCAGGGTTGCAAGACATAGTGTGGCATGATACTGAAGGAAAAAAAAATATGAAGAATTAA 1323 0.4051 MSSMKVAKGRILVGKYELGKTIGEGSFAKVKFARNVQNGNYVAIKILDRKHVLRLNMMEQLMKEISTMKLINHPNVVRILEVLASKTKIYIVLEFVDGGELFDKIAANGRLKEDEARNYFQQLINAVDYCHSRGVYHRDLKPENLLDSNGVLKVSDFGLSTYSQKEDELLHTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPTHMALYKKIGRAEFSCPSWFSPQAKKLLKHILDPNPLTRIKIPELLEDEWFKKGYKPTSFTEEEDLNVDDVVVAFNESNENLVTERKEKPVSMNAFELICRSQSFNLDSLFEKQTGQVKQETSFTSQCPANEIMFKIEEAAKPLGFNVYKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSVHMVELRKTGGDTLEFHKFYKIFSSGLQDIVWHDTEGKKNMKN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02392 440 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gma03g02392 440 Pfam Protein kinase domain 16 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02392 440 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Gma03g02392 440 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Gma03g02392 440 Gene3D Kinase associated domain 1, KA1 304 430 - -
Gma03g02392 440 Gene3D Transferase(Phosphotransferase) domain 1 96 295 - -
Gma03g02392 440 PANTHER - 10 431 - -
Gma03g02392 440 Pfam NAF domain 307 367 IPR004041 GO:0007165
Gma03g02392 440 CDD CIPK_C 311 418 - -
Gma03g02392 440 SUPERFAMILY Protein kinase-like (PK-like) 12 288 IPR011009 -
Gma03g02392 440 ProSiteProfiles Protein kinase domain profile. 16 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02392 440 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 10 431 - -
Gma03g02392 440 SMART serkin_6 16 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02392 Gma-Chr3 49023547 49030345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02392 10 430 CBL-interacting serine-threonine protein kinases AT1G01140 73.660 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma03g02392 Pkinase 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02392 - - gmx:100777218 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02392 03 49023547 49030345 Gma03g02392 03 49023547 49030345 ECH