Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02391 ATGATCACCTTCTTCCCCTTCTTCTCCTTCCCTTCTTCCCCTTCTCCAATAGAAACCACCACCACCGTGCCATCACAGTTGACAACGCCGTGCCACCACCGCAGCATTCAACCAAGTGAGGAAGCCAAAAAAAATAACAGTGTCGAATTTGGGCATAGAGATGGTAGCAAAAACAGAAACGAAAATGGAATCACTATGAATAACGAGAAGTATGTCCGTTACATGCCTAAGCAGGTTGAAGCCCTAGAAAGGTTCTATCACGATTGCCCCAAATCTAGCTCCATTCGCCGCCAGCAACTCATTCGCAAGTGCCCTATTCTCTCCAACATTGAGCCCAAACAAATCAAGCTCTGTTTGACATCGTGGGCCGCTTGCACTCATAGCATCCCTGCATTCGTGTTGTTATTTGCCGCCCTTGTCTCCTCTTCTCACCAACCAGCCTACTTAATCCTATTCCACACAAGGATGGTATCAAATGAGACTGAGGGAGAGGGAGGCTACAACAAGAAAAGTAGTAGGTGGATAGCAACAAAGTCATCTTCATGTTTGTTTATTTTATTCTCGTCCTTGTTGATAAGCATAGCAGGAGGTTCCATGCTTGGATTCTGGCTACACAAATACCATCCATCAAATACCCAACTCTGGATGGTACCTTTTGGCTTCCTTCTCTTCCTTACCCCTCTCTTTATCTGCCTCTCCGTAATCATTCCTGACCTCTGTGTTCCCAGAACCAGAATCGACCAAGACCAAGCTTTTAAGATACAGGATCATCCTCTTACTTTGCCATCTATACAATAG 798 0.4536 MITFFPFFSFPSSPSPIETTTTVPSQLTTPCHHRSIQPSEEAKKNNSVEFGHRDGSKNRNENGITMNNEKYVRYMPKQVEALERFYHDCPKSSSIRRQQLIRKCPILSNIEPKQIKLCLTSWAACTHSIPAFVLLFAALVSSSHQPAYLILFHTRMVSNETEGEGGYNKKSSRWIATKSSSCLFILFSSLLISIAGGSMLGFWLHKYHPSNTQLWMVPFGFLLFLTPLFICLSVIIPDLCVPRTRIDQDQAFKIQDHPLTLPSIQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02391 265 CDD homeodomain 76 116 IPR001356 GO:0003677
Gma03g02391 265 MobiDBLite consensus disorder prediction 18 35 - -
Gma03g02391 265 Gene3D - 64 122 - -
Gma03g02391 265 PANTHER OS08G0113900 PROTEIN 157 258 - -
Gma03g02391 265 MobiDBLite consensus disorder prediction 36 59 - -
Gma03g02391 265 MobiDBLite consensus disorder prediction 18 63 - -
Gma03g02391 265 PANTHER OS08G0113900 PROTEIN 157 258 - -
Gma03g02391 265 Pfam Putative AtpZ or ATP-synthase-associated 185 236 IPR032238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02391 Gma-Chr3 49019282 49021373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02391 66 117 Homeobox Transcription Factor Family AT1G52150 82.692 1.22e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02391 K09338 - pvu:PHAVU_006G116500g 116.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02441 19 52882284 52886053 Gma03g02391 03 49019282 49021373 GST