Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02388 ATGGCTAACCCACCCCCAGTTCGTCCATGGTTTCGCTTAGCCTCAATTCGCTCTAGCCCACCCCCACCCCCACCCCCTGCACCTGCCCCTGCCCAAGAGCCACGCCTGCCAGCATTTAGAACTGCTTCAGCACCATCATCACCACAGATTCAGCCAACTCAACCAGCTCCCCAGCCTCAAGAACACCCTTCTTCTCAACATAACAGATTCTCCTCTTCTTCACTCCCTACTTCCCCAGAGAATAAAAACATTACCCGTGTTCCCTTGCCAAGTCCCTCTCACTCTCCAAACACCTCACCTCCCCCCTCTCCTCTCGCCCTCACACCTTCCCAGTCGAGGAGCGAGACCATGATACCCGACCAGCCCGAGCCCAAAACCGTGCTAGTCCAGAAAACCATCGACCCCAGGCCCAAGCCCTGGCACAATGCCCGTCACGGACAACACGACACCGTCAAAGAAAGTGAATCCAAGGAGAAGGTTGTTCACCGGAAGCTCTCGGAGTCTGAGGAGTCCGGCATGAGAGTCATAACCATTGCAGGGGAAAACAGAGGAGCGTACATGGAACTCATCCAGTCCCCGAAGAAACACGATCCAAAGTACCTTCACAAGAAGGGGAATTCCAACATCAACGTTGACGGGGTTGAATCCGAGGGTTCGAGTGCCGAGGAAGGGACTGTGAACAAGAAGGATAAGAATCAGAAAGGTACGAGTTCTTCTTCGTTTCCGATGTCTGCGTACATGAACAGCAACGTGCAGTGTGTGAACAACTCGCTGCTGTACCACGCTTCATGCTCCCACCACGACCCCGGAGTGCGCCTCTCTCTTTCCAAGAAACCATTCGGGGAAGATCGGATCCGATGTGAAACAATAATTTGTGAGGTAGACAGACAGAGGCGGCAGCAAATAAGAATGGCTTCAAATCCCAAACCTTTGACTTTTGAGGAGGTGGCTAATCACAACAACAAAAAGGATTGCTGGATTATTATCAATGGAAAGGTGTATGATATCACGCCATTTCTGGATGAGCATCCTGGAGGAGATGAAGTTTTGGTAACGTCAACAGGGAAGGATGCCACCATTGATTTTGAAGATGTGGGCCACAGTGATTCTGCCATAGAAATGATGGAAAAATACTTCGTCGGGAAGGTTGACACTTCCACTCTTCCAGCGAAAGTTAACCATAGTCTGCCACAACCTACACAAGCAGTACTATGGCAAAAAGAAGCATGCTAG 1233 0.5085 MANPPPVRPWFRLASIRSSPPPPPPPAPAPAQEPRLPAFRTASAPSSPQIQPTQPAPQPQEHPSSQHNRFSSSSLPTSPENKNITRVPLPSPSHSPNTSPPPSPLALTPSQSRSETMIPDQPEPKTVLVQKTIDPRPKPWHNARHGQHDTVKESESKEKVVHRKLSESEESGMRVITIAGENRGAYMELIQSPKKHDPKYLHKKGNSNINVDGVESEGSSAEEGTVNKKDKNQKGTSSSSFPMSAYMNSNVQCVNNSLLYHASCSHHDPGVRLSLSKKPFGEDRIRCETIICEVDRQRRQQIRMASNPKPLTFEEVANHNNKKDCWIIINGKVYDITPFLDEHPGGDEVLVTSTGKDATIDFEDVGHSDSAIEMMEKYFVGKVDTSTLPAKVNHSLPQPTQAVLWQKEAC 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02388 410 MobiDBLite consensus disorder prediction 1 168 - -
Gma03g02388 410 MobiDBLite consensus disorder prediction 93 107 - -
Gma03g02388 410 MobiDBLite consensus disorder prediction 196 241 - -
Gma03g02388 410 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 308 384 IPR001199 -
Gma03g02388 410 SMART Cyt_b5_2 311 384 IPR001199 -
Gma03g02388 410 PANTHER EXTENSIN-RELATED 2 289 - -
Gma03g02388 410 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 339 346 IPR018506 GO:0020037
Gma03g02388 410 PRINTS Cytochrome B5 signature 358 365 IPR001199 -
Gma03g02388 410 PRINTS Cytochrome B5 signature 333 343 IPR001199 -
Gma03g02388 410 PRINTS Cytochrome B5 signature 371 383 IPR001199 -
Gma03g02388 410 PRINTS Cytochrome B5 signature 343 357 IPR001199 -
Gma03g02388 410 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 306 390 IPR036400 -
Gma03g02388 410 MobiDBLite consensus disorder prediction 60 92 - -
Gma03g02388 410 MobiDBLite consensus disorder prediction 16 33 - -
Gma03g02388 410 Pfam Cytochrome b5-like Heme/Steroid binding domain 312 383 IPR001199 -
Gma03g02388 410 PANTHER OS01G0106600 PROTEIN 2 289 - -
Gma03g02388 410 MobiDBLite consensus disorder prediction 137 168 - -
Gma03g02388 410 Gene3D - 302 388 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02388 Gma-Chr3 48985279 48991639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02388 304 398 NADPH P450 reductases AT5G53560 65.263 1.49e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02388 - - gmx:102664793 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02388 03 48985279 48991639 Gma03g02388 03 48985279 48991639 ECH
Gma19g02435 19 52818110 52823003 Gma03g02388 03 48985279 48991639 GST
Gma03g02388 03 48985279 48991639 Gma07g00492 07 4634183 4639445 PCT
Gma07g00492 07 4634183 4639445 Gma03g02388 03 48985279 48991639 PCT