Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02373 ATGGAAGCGGAAACTCGACGGAAAGTGGAGGAGATGGTGTTGGATATTCTGAAGAAATCCAATATTAAAGAAGCCACTGAGTTCACCATCCGAGTCGCTGCCTCCGAGCGTCTCGGCATCGACCTCTCCGACACCGCCAGTAAGCACTTCGTGAGATCCGTCGTCGAGTCTTTTCTTCTCTCCGTCGCGGCCAATGAAAAGTCCAAAGACGCAGAGAAGAAGAAGGAGAACGAAGATATTGCCGCCAAAAACGACGACGTAGCGAAGAAGGAAGATGTCGTTGTGGCCAACGAAGAAGAGTCCCGAGAGACAGAGGTGCTGCCCAAACTGAAGAGGGATGATCCCGAACGCGTTATTTGCCACCTGTCCAACAGGAGGAACGTGGCGGTGAAAGATTTCAAAGGGACAACCCTGGTCTCAATTAGGGAGTTCTATATGAAAGATGGAAAACCACTTCCTGGTTCGAAAGGGATAAGTTTATCTTCGGAACAATGGTCGACCTTCAAGAAGAGTGTTCCTGCCATAGAGGAAGCTATCAAAAAGATGGAAGAAAGGATAGGATCGgagcctaatggtaagcaaaatggagatgtgtcaaattcagttgttgatgttgcttatcttgagcctaatagtaagcaaaagggagatgcatcaaattcagttgttgatgttgctactcttgagcctcatgTGACAGTCCCCAGCAAGTTGCATCATTCAAATGGAGAAGCTAACTATCCATGGTTTCTCCTGATTGAAATTAAGAATCAGACATATCAACAGACCCAGACACAAGTTAAGAGGTTACCCAATTCAGCTTCCTCACCGCCTCTTCAGTTTCAATATAGTTTGGAGGCTGCCTTCTTGCAAGCTGCCACCAAATGGAAGCGCAACTGGCGCTGGGAAGGATGTGTGTCACGTTCACATTCTAGGTCTTGGGTGGCGGGGATGGTTACGTTCGGGTCACGTGGCAAACCTCTGTGTTCTCGCAAGTGGCCACAAGAGGAAGTGCAACCGACGTTGAGAATGGTGTGCATTGCGAAAACAAGGAGAGAGGAATGTGGTATGACCAATTTGAGCCATGTAGGCTATGGCTGTTAA 1104 0.4293 MEAETRRKVEEMVLDILKKSNIKEATEFTIRVAASERLGIDLSDTASKHFVRSVVESFLLSVAANEKSKDAEKKKENEDIAAKNDDVAKKEDVVVANEEESRETEVLPKLKRDDPERVICHLSNRRNVAVKDFKGTTLVSIREFYMKDGKPLPGSKGISLSSEQWSTFKKSVPAIEEAIKKMEERIGSEPNGKQNGDVSNSVVDVAYLEPNSKQKGDASNSVVDVATLEPHVTVPSKLHHSNGEANYPWFLLIEIKNQTYQQTQTQVKRLPNSASSPPLQFQYSLEAAFLQAATKWKRNWRWEGCVSRSHSRSWVAGMVTFGSRGKPLCSRKWPQEEVQPTLRMVCIAKTRREECGMTNLSHVGYGC 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02373 367 Pfam DEK C terminal domain 5 59 IPR014876 -
Gma03g02373 367 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 3 185 - -
Gma03g02373 367 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 185 IPR045125 GO:0003713|GO:0060261
Gma03g02373 367 SUPERFAMILY ssDNA-binding transcriptional regulator domain 119 181 IPR009044 GO:0003677|GO:0006355
Gma03g02373 367 Gene3D Transcriptional Coactivator Pc4; Chain A 110 187 IPR009044 GO:0003677|GO:0006355
Gma03g02373 367 Pfam Transcriptional Coactivator p15 (PC4) 120 170 IPR003173 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02373 Gma-Chr3 48849795 48857581 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Gma03g02373 DEK_C 2.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02373 - K25815 gmx:100818901 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02416 19 52647120 52653158 Gma03g02373 03 48849795 48857581 GST