Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02365 ATGGAGCAGAAGAGGAGCAGTAGCAAGATGTACAACCTGTTTGTGAAGCACTTGGACGGGAAAACCCTAACCCTCCTATTCCCCTCTCCGATCCTCTACGCGAGTTCCATCAGGGATCGCCTCTTCCAACTCACCGGAATCCCCGCCCACCACCAGCGCCTTGTTACCGGCTGCCGCCACCTCAACGACGACAAATCTGCCATCCAATGCCTCCCGGAGGACGGCAACATGTTCCCCTCCGTGCGCCTCCTCCTGCGCCTCAAGGGCGGCAAGGGAGGCTTCGGCTCGCTTCTCCGTGGCGCCGCCACCAAGGCCGGGCAGAAGAAGACCAACAATTTCGACGCGTGCCGCGACATGAGTGGCCGGAGGCTGAGGCACGTCAACGCGGAGAAGAGGTTGGAGGAGTGGAAGGCCGGAGAACAGGAGAGGAAGCTCGAGAAGGTGGCCGAGGAGTTTCTCAAGAAGCAGATGAAGAAGGGAAAGGGTAAGGGTGAAGGTGAGGGTGGGGCTCAAAAATATGTCGCCAAATATAGGGAGGAATCTGAACGTTGTGTTGCCGAGGTTGCCTTGTCCGTTAAGGAGGCTCTCACTGCCAAGCGCAAGAGCCCTTCACAACCTCACCATGATGCTAAGAAATTGAAGATATGGATGGGGAAGAGGAAATTGAATGAAAGTGATAGTGATGATTCTGATGAAGAGGTGGAGATCGAGAAATCAGATTTGTTGAATGGTCCGAATGAGTCGGGCTCTAATAAGGCTGAGGGCAGTTTGGGTTCGGTAAATGGGGGCGGAGGCTCTTCTGGTGCTGGCTCGTGTGAAAGTGGGTCTGAAGAAGAGAAGGAAGCTGCTGTAGAAGGAAATGTGGGATCTGTTGCGATGCTGGGTGGTGAAAGTATTCAGGCTGCAGCTGAACCTGTGATAAATGATGAGGCTACTGAAATGCCAAAGGAGTCGGTGGTTGCTGGAATTAATGCTGAAGATAATGGATATCAGGATTGCTATGTAGGCGTGCCTGACAAGTTCGATGGTGCTGTGAATCAGGCCTCAACTGTTATGGGCTCTGAAACTGTCGCCAGTGCTGGTGAATCTAATTATATGGAAATTGATGGATCTCTTGAGCATAAAGCAGCAGTCAATGAAGAAAGCTCACCAAGCACTAGTGTTCCTGTGTTGGAGGAGCCCCTGAATTTTGATGCCTTTAATTCAGCTGCTGAACTTGAGGTTCTTGGCTTGGAAAGGTTGAAGTCTGAACTGCAGTCACGTGGGTTAAAATGTGGAGGTACTTTGAAGGAGCGTGCTGCCAGGCTTTTTCTTTTAAAATCAACTCCCCTGGATGAACTTCCAAAGAAGCTGCTTGCGAAGAATGTTCATATTGGGCTGTATTTTGATGTAATAAATACCGTTACCAGCCAGCCAAAGGAAGCTGAACACTGTATAACCCAAGAATTGTGCATTATGAACAATTCCAAATTTTCTTTTTGGTATTATATTATGAGATGA 1500 0.4987 MEQKRSSSKMYNLFVKHLDGKTLTLLFPSPILYASSIRDRLFQLTGIPAHHQRLVTGCRHLNDDKSAIQCLPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAGEQERKLEKVAEEFLKKQMKKGKGKGEGEGGAQKYVAKYREESERCVAEVALSVKEALTAKRKSPSQPHHDAKKLKIWMGKRKLNESDSDDSDEEVEIEKSDLLNGPNESGSNKAEGSLGSVNGGGGSSGAGSCESGSEEEKEAAVEGNVGSVAMLGGESIQAAAEPVINDEATEMPKESVVAGINAEDNGYQDCYVGVPDKFDGAVNQASTVMGSETVASAGESNYMEIDGSLEHKAAVNEESSPSTSVPVLEEPLNFDAFNSAAELEVLGLERLKSELQSRGLKCGGTLKERAARLFLLKSTPLDELPKKLLAKNVHIGLYFDVINTVTSQPKEAEHCITQELCIMNNSKFSFWYYIMR 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02365 499 Pfam Replication stress response SDE2 C-terminal 384 454 - -
Gma03g02365 499 SUPERFAMILY Ubiquitin-like 6 75 IPR029071 -
Gma03g02365 499 Coils Coil 401 421 - -
Gma03g02365 499 CDD Ubl_ubiquitin_like 13 78 - -
Gma03g02365 499 MobiDBLite consensus disorder prediction 197 284 - -
Gma03g02365 499 Pfam Silencing defective 2 N-terminal ubiquitin domain 11 156 IPR024974 -
Gma03g02365 499 PANTHER SPLICING FACTOR SF3A-RELATED 10 455 - -
Gma03g02365 499 Gene3D - 3 92 - -
Gma03g02365 499 MobiDBLite consensus disorder prediction 200 227 - -
Gma03g02365 499 MobiDBLite consensus disorder prediction 243 273 - -
Gma03g02365 499 PANTHER REPLICATION STRESS RESPONSE REGULATOR SDE2 10 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02365 Gma-Chr3 48796075 48799326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02365 388 459 C2H2 Transcription Factor Family AT5G06160 43.056 7.08e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02365 K25059 - gmx:100781694 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02365 03 48796075 48799326 Gma03g02365 03 48796075 48799326 ECH
Gma19g02407 19 52602734 52606125 Gma03g02365 03 48796075 48799326 GST