Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02359 ATGGAAGAGAGCACCAAGAGGAAATACACTAATCTGATCCATGAACTAATCCAAGGAAAGGAACTAACAAAGCAGCTCAGTGACCATCTGGTTTCATCTTCTCCATCATCCCATGAAACCAATGAATTGTTGGTTGAGAAAATACTTTTGTCCTATGAGAAAGCACTCACCATGTTGAACTGGGGGTCTATTGTGGGAGAAGCCAAAACCACCAGTCTCAACATCATGGATTCCCGTTGTTCTTTTACAAATAGTGAAAGCCCCAGAAGTGAGGTCGTGGACCGTGAATTTGAGCACAAAGCTGTCTTCAAGAAAAGAAAGACCATGCCCAGATGGACCGAGCAAGTGAAGATTTGCTCAAGAACAGGACTTGAAGGGTCTTTGGATGATGGATATAGCTGGAGAAAATATGGCCAAAAGGATATTCTCGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACACAGAGAAATGTACAAGGGTGTCTAGCAACAAAACAAGTTCAAAGGTCAGATGAAGACCCAACAACAATTGAGGTGACCTACAGAGGAAGACATACATGCACGCAAGCTAAGCATTTAAACAAGGCATTCTCATCAAACATAAAGATAGGTTTGGGGGAAAATCAATTCCAAAAGAATCAACCACTTCTAGAGAAAACACAACAACAGAACCCTGAGGGGATTTTCACCTTTGAAACAGAGCTTAAAGTCAAAACAGAGGAATTGGAAACCAAGGAGGATATCTTCCCATGGTTTTCCTTTTCTTCTTCATCAATTGGATCAGAAAATGAGGATAACATGTTACCCGACACCATGATTGAAAACCATTTCATGGAAAGCTTTTCTCCTGTATTCATATCACCAGCGACTTCAGAATCAAACCCTTTCTGTTTGTCAGCATACGACTTGGACAGCACTGGACTATTATGCCGAAACATACAAACCTCAGAATCTGATATCACTGAGATAGTTTCAGCCCTAACTTCAGTCACCAACTCCCCAATCCTGGATTTGGATATCTTACTTGATAAGGGGGATTTTGACACGGATTTCCCTTTCAACATTCCTGAATTTTTCTCTTCATAA 1089 0.4096 MEESTKRKYTNLIHELIQGKELTKQLSDHLVSSSPSSHETNELLVEKILLSYEKALTMLNWGSIVGEAKTTSLNIMDSRCSFTNSESPRSEVVDREFEHKAVFKKRKTMPRWTEQVKICSRTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTQRNVQGCLATKQVQRSDEDPTTIEVTYRGRHTCTQAKHLNKAFSSNIKIGLGENQFQKNQPLLEKTQQQNPEGIFTFETELKVKTEELETKEDIFPWFSFSSSSIGSENEDNMLPDTMIENHFMESFSPVFISPATSESNPFCLSAYDLDSTGLLCRNIQTSESDITEIVSALTSVTNSPILDLDILLDKGDFDTDFPFNIPEFFSS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02359 362 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02359 362 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02359 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 355 IPR044810 GO:0003700
Gma03g02359 362 SUPERFAMILY WRKY DNA-binding domain 127 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g02359 362 Gene3D WRKY domain 114 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g02359 362 ProSiteProfiles WRKY domain profile. 123 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02359 362 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02359 Gma-Chr3 48760348 48763203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02359 8 194 WRKY Transcription Factor Family AT5G24110 48.148 8.09e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma03g02359 WRKY 1.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02359 - - gmx:100127387 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02359 03 48760348 48763203 Gma16g00238 16 2573087 2576271 ECH
Gma03g02359 03 48760348 48763203 Gma03g02359 03 48760348 48763203 ECH
Gma07g00537 07 5178644 5181564 Gma03g02359 03 48760348 48763203 ECH
Gma01g02250 01 57675046 57677042 Gma03g02359 03 48760348 48763203 ECH
Gma05g02103 05 42274814 42276126 Gma03g02359 03 48760348 48763203 ECH
Gma08g00208 08 1800899 1802212 Gma03g02359 03 48760348 48763203 ECH
Gma19g02399 19 52546413 52549172 Gma03g02359 03 48760348 48763203 GST
Gma03g02359 03 48760348 48763203 Gma07g00537 07 5178644 5181564 PCT
Gma03g02359 03 48760348 48763203 Gma16g00238 16 2573087 2576271 PCT
Gma07g00537 07 5178644 5181564 Gma03g02359 03 48760348 48763203 PCT
Gma16g00238 16 2573087 2576271 Gma03g02359 03 48760348 48763203 PCT