Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02340 ATGGGAAACAGTGAGGAAGAGAAATCTACTAAGACTGAAAAGCCTTCTTCACCTGTAACAATGGATCAGGCGAATCAGACCAACCAGACCAATATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCAcCATACTACAACTCAGCTGTTGCTTCTGGTCACGCTCCTCACCCGTACATGTGGGGGCCACCACAGCCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATCCACATGGAGGGGTTTATACTCACCCTGCAGTTCCTATTGGGCCACTTACACATAGTCAAGGAGTTCCGTCTTCACCTGCTGCTGGGACTCCTTTGAGCATAGAGACACCACCCAAATCATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCAATTGGCAATGGCCATGCTGAAAGTGCAGAGCGTGGAGGTGAAAACAGGCTCTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCAATCAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAACTGAGATACAAGGCAGTCCAATTTCCAAAGAGACTGCAGCTTCTAATAAGATGTTGGGAGTTGTCCCTGCCAGTGTTGCAGGAACAATAGTTGGACATGTAGTTTCTTCAGGTATGACCACTGCACTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAAACAAGTGCCCCACAACCTTGTCCAGTATTGCCTGCAGAAGCTTGGGTACAGAATGAGCGTGAGCTGAAACGGGAGAGGCGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAAACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATGCTGAGAATGCAACACTGAAATCAGAAATTAATCGACTGACTGAAAGTTCTGAAAAAATGAGGGTGGAAAATGCTACATTAAGGGGAAAACTTAAAAATGCTCAACTGGGACAAACCCAAGAGATAACTTTGAAGATAATTGACAGCCAGAGGGCTACACCTGTAAGTACAGAAAACTTATTATCAAGAGTTAATAATTCCGGTTCTAATGATAGAACTGTGGAGGATGAGAATGGTTTTTGCGAAAATAAACCAAACTCTGGTGCAAAGCTGCATCAACTGCTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1275 0.4533 MGNSEEEKSTKTEKPSSPVTMDQANQTNQTNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYPHGGVYTHPAVPIGPLTHSQGVPSSPAAGTPLSIETPPKSSGNTDQGLMKKLKEFDGLAMSIGNGHAESAERGGENRLSQSVDTEGSSDGSDGNTSGANQSRRKRSREGTPTTDGEGKTEIQGSPISKETAASNKMLGVVPASVAGTIVGHVVSSGMTTALELRNPSSVHSKTSAPQPCPVLPAEAWVQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENATLKSEINRLTESSEKMRVENATLRGKLKNAQLGQTQEITLKIIDSQRATPVSTENLLSRVNNSGSNDRTVEDENGFCENKPNSGAKLHQLLDTSPRADAVAAG 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02340 424 Pfam Disordered region downstream of MFMR 133 262 - -
Gma03g02340 424 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 424 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma03g02340 424 PANTHER G-BOX-BINDING FACTOR 3 1 424 - -
Gma03g02340 424 MobiDBLite consensus disorder prediction 104 135 - -
Gma03g02340 424 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Gma03g02340 424 MobiDBLite consensus disorder prediction 381 424 - -
Gma03g02340 424 MobiDBLite consensus disorder prediction 1 28 - -
Gma03g02340 424 MobiDBLite consensus disorder prediction 153 217 - -
Gma03g02340 424 MobiDBLite consensus disorder prediction 203 217 - -
Gma03g02340 424 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Gma03g02340 424 Gene3D - 282 337 - -
Gma03g02340 424 Coils Coil 299 340 - -
Gma03g02340 424 MobiDBLite consensus disorder prediction 162 188 - -
Gma03g02340 424 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Gma03g02340 424 MobiDBLite consensus disorder prediction 280 304 - -
Gma03g02340 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Gma03g02340 424 SUPERFAMILY Leucine zipper domain 282 337 IPR046347 GO:0003700|GO:0006355
Gma03g02340 424 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Gma03g02340 424 MobiDBLite consensus disorder prediction 14 28 - -
Gma03g02340 424 MobiDBLite consensus disorder prediction 106 135 - -
Gma03g02340 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02340 Gma-Chr3 48617431 48623510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02340 1 424 bZIP Transcription Factor Family AT2G46270 53.271 8.91e-127 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma03g02340 MFMR_assoc 1.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02340 K09060 - gmx:778133 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02340 03 48617431 48623510 Gma03g02340 03 48617431 48623510 ECH
Gma19g02380 19 52398090 52404810 Gma03g02340 03 48617431 48623510 GST