Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02328 ATGAATTGTTTTCCGTGTTTTTCAAAGACTAAGAGAACCAACAGCAAGAGGGAGCAACAAGGCGTTATACCACAAGAAAACGTTGTCACAAGGACACCACCAGATGTAAAGAAACAAAAGGCAGATGATCCAAACCAAGTTGACACCTCAAATATTCAAGCACAAAATTTCACATTCCGTGAGCTTGCAATTGCAACAAAGAATTTCCGCCAAGAATGTTTGTTGGGAGAAGGGGGCTTCGGCAGAGTTTATAAGGGAACAATTCCTGCAACCGGGCAGGTGGTAGCAGTGAAGCAACTCGACCGAAATGGGGTCCAAGGTAGCAAGGAATTTCTGGTTGAAGTTTTGATGTTAAGTCTCTTGAACCATGAAAATCTGGTCAAACTCACTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTCTATGAGTTCATGCCAGGGGGCTGTTTAGAAGACCGTCTTCTTGAGGTTGTTCCTGAAGCCCAGAGTGCTGCTCCTGAAAATGAAGCTGGATCTGGTAAGGACAGCGATAGCTCCTCCTCCAATGAAGAAGAGGAGAATGTAACTGCTGAAACTCAGGTTAGTGCAAAATACCAAGAGAGCGAAGACGCCTCAGAGAATGAGTATGATTATTATGGGAATGAAAACCAACAAAAGTACAGTCCACAAGACATCAAACAGACCAAGGAGTTCTACTCCAAATCAAGCCGCAAGAGCAGCACCAGATCAAAGAACGGAACCACTTCTTCTAGCTACAGAAGCAGCTCCACTTCAGATTCAGAGAATGGAAGCAACAAAACCAGTAGGAAAAGCAGCAGAAAGAACGgcagcaagaagtcttccttaagccagaagagcggtaagaaatcttcattgagccaaaagagcagcagcaagaaatcttcTGTGAGAGTCTTAAGCCACAAGAAAAGCAAGGATGGAAGCCATTCCCCTAATTCAAGACGCAGTAGCAGCAGTGGCGGTGATCTTTTGGATCGTAGCGGAAGCAGGCCATCAGAAGGGAATGTTTCAATTGGCCTAATCAGCAGTGAGAACTCAGACAGTGACAGCAGCATACGATCAGAGGAAAGGAGCAGCATGCATTTAAATCATACCAGCAGCAGATCGGAGGAGGGAATTGTTTATTACCGATAG 1158 0.418 MNCFPCFSKTKRTNSKREQQGVIPQENVVTRTPPDVKKQKADDPNQVDTSNIQAQNFTFRELAIATKNFRQECLLGEGGFGRVYKGTIPATGQVVAVKQLDRNGVQGSKEFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMPGGCLEDRLLEVVPEAQSAAPENEAGSGKDSDSSSSNEEEENVTAETQVSAKYQESEDASENEYDYYGNENQQKYSPQDIKQTKEFYSKSSRKSSTRSKNGTTSSSYRSSSTSDSENGSNKTSRKSSRKNGSKKSSLSQKSGKKSSLSQKSSSKKSSVRVLSHKKSKDGSHSPNSRRSSSSGGDLLDRSGSRPSEGNVSIGLISSENSDSDSSIRSEERSSMHLNHTSSRSEEGIVYYR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02328 385 Gene3D Phosphorylase Kinase; domain 1 31 145 - -
Gma03g02328 385 SUPERFAMILY Protein kinase-like (PK-like) 46 159 IPR011009 -
Gma03g02328 385 MobiDBLite consensus disorder prediction 357 372 - -
Gma03g02328 385 MobiDBLite consensus disorder prediction 173 201 - -
Gma03g02328 385 ProSiteProfiles Protein kinase domain profile. 69 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02328 385 MobiDBLite consensus disorder prediction 319 356 - -
Gma03g02328 385 MobiDBLite consensus disorder prediction 239 266 - -
Gma03g02328 385 MobiDBLite consensus disorder prediction 278 302 - -
Gma03g02328 385 PANTHER OS07G0668900 PROTEIN 1 159 - -
Gma03g02328 385 MobiDBLite consensus disorder prediction 211 230 - -
Gma03g02328 385 Pfam Protein tyrosine and serine/threonine kinase 73 196 IPR001245 GO:0004672|GO:0006468
Gma03g02328 385 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Gma03g02328 385 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 159 - -
Gma03g02328 385 PANTHER OS07G0668900 PROTEIN 157 370 - -
Gma03g02328 385 PANTHER RECEPTOR KINASE-LIKE PROTEIN 157 370 - -
Gma03g02328 385 MobiDBLite consensus disorder prediction 162 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02328 Gma-Chr3 48517337 48520035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02328 1 161 Glycoside Hydrolase AT3G07070 60.234 3.68e-60 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma03g02328 PK_Tyr_Ser-Thr 8.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02328 - - gmx:100807682 320.857