Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02321 aggctttatgagttgggagcaaggcgagttttggtgactggaacgggacctttaggttgcgtgcctgcagaactggcgcagcgtagcagaaatggggagtgtgcagcagagctgcaagaagcttctgctttgttcaatccacaactcgttcagttggtgaatcaactcaactctgaaattggttcggttgtcttcatttcagccaatgctttcgaatccaatatggattttattagtaacccacaagcgtacggatttgttacatcaaaaCATCACAACATTGTGGTCCATATCGAGAATTGTTGTGACTCGGTGTGGAGGAACGTGGTTGCGGCCCTCAGGCGGCGTGGTTATGTCGTCTATGTGATTGTGATTGTGATAGGGGCTTGGGCGGCGGAAATAATTCCTAATTGCATCTCATTCATTCAACTAGCCCTTGGGGTTGAGGCAAAGGCAAGGGCTTTCTTTGTATTTGGAGACTCACTGGTTGACAGTGGTAACAACAATTACTTAGCGACCACTGCACGGGCTGATTCCCCTCCTTATGGCATTGACTATCCAACTCGTAGACCAACCGGTCGTTTCTCCAATGGCCTCAACATTCCCGATCTTATCAGTGAACGAATAGGTGGCGAGTCCGTGTTGCCTTATTTGAGTCCACAACTAAAAGGTGAAAATCTTCTGAATGGAGCCAATTTTGCTTCCGCCGGAATTGGCATTCTTAACGACACTGGATCTCAATTTCTAAATATAATCAGAATGTATAGACAATTGGACTACTTTGAAGAGTACCAGCAACGAGTGTCCATTCTAATTGGAGTAGCGCGGGCTAAGAAACTTGTGAATCaagcattggtcctcatcactgttggtggcaacgatttcgttaacaattactacttggtgccttattctgcaaggtctcgccagtattcgctacaggattatgtcaaatttctcattgtcgagtaccgtaaactcttgatgagactatatgatttgggagctcgaagaGAATCAAATGGAATCCAAGAAGCAGTGGAGCGAAGGAGCCACTTCATCCATCTCAATGAGGCAAAAACGGTTAAAGATGGCAAGGAAGCAGTGGATCTGTGTCGTTCTGGGGAAAATTTTGACATAATTTTCATGGACAAAGAAATGCCTATCATGGATGGTCACGAGGCGACAAAACATCTAAGTGCTATGGGTGTGAAGAGCATCATTGTGGGAATCACTACCCGTGCTGATGGAAAAGATAAAGAGGAATTTCTAGCTTCTGGATCGAACCACTGCTTTGAGAAGCCTCTTGACCAAGCAAAGCGAGTAGTGGAGGTGGAGAGAGAGAGAAACGAAGCAATTGAATTGGCTATGGCTGTACCCGTCGAGGAAGCCATTGCAGCTCTATCCACATTCTCGCTCGAGGATGAGCAACCAGAGGTGCAGGGACCTGGAGTGTGGGTGTCAACTGAGAGAGGTGCAACAGAAAGTCCAATAGAGTATAGCGATGTTTCTGCTTACAGACTATCTCTATCAGAGGACACAAAAGCTCTCAATCAGCTGAATGCCCTTACCCAAGAGGGAAAGGAGATGGCATCGGTGCTTTACACATATCGCAGTTGTGTCAAAGCCCTTCCTCAGCTACCTGATTCTATGAAGCAAAGTCAAGCTGACTTATATTTGGAAACATATCAAGTTCTGGATTTGGAAATGAGTCGTCTACGTGAAATTCAGCGTTGGCAAGCATCTGCTTCCTCAAAATTAGCTGCTGACATGCAACGTTTTTCTAGGCCTGAGCGACGCATTAATGGTCCTACAATATCTCATTTGTGGTGTGTTATAATGATTTATGCTTttgttgttggtttttgttattgttgttgttttgtgttTTTTATTTTCTCTGTTCTTGACTGCAGGTCTATGTTGAAGTTGCTTGATGTTTTGGTGCAACTTGATCATCTTAAAAATGCTAAGGCTAGCATACCTAATGACTTTTCATGGTATAAAAGGACTTTCACACAAGTCAGTGGTCAGTGGCAAGACACTGATTCAATGAGGGAGGAATTAGATGATTTGCAGATTTTCTTGAGCACAAGATGGGCTATTTTGTTGAATTTGCATGTTGAGATGTTCCGTGTGAACAATGTAGAAGACATTCTTCAAGTTCTTATAGTCTTTGTTGTAGAGTCTTTAGAATTGGACTTTGCACTTCTCTTTCCAGAGCGCCACATTCTTTTGCGTGTTTTGCCTGTTCTTGTTGTCCTAGTGACATCATCAGAGAAAGACAGCGAGTCTCTGTATAAGAGGGTGAAAATCAACAGACTGATCAATATATTTAAGAATGAAGCAGTCATTCCTGCATTTCCAGATCTGCATTTGTCTCCTGCTGCAATATTGAAGGAATTATCAACATACTTTCCAAAATTTTCTTCCCAAACTCGTCTTCTCACCCTTCCAGCACCTCATGAGCTTCCACCTCGTGAAGCACAAGAATATCCTCCAAATTGTTTTATACATTATCTGATCATCAATCATATTGGAGCCATCCGTGCTGAGCATGATGATTTTGTTATTCGTTTTGCTTCTGCAATGAATCAGCTGTTACTGTTGAAGTCAACTGATGGTTCTGATGTTGAATGGAGCAAAGAAGTCAAGGGGAACATGTATGATATGATTGTTGAAGGTTTTCAGCTATTAAGCAGATGGACTGCACGCATATGGGAACAATGTGCTTGGAAATTTTCTCGACCATGCAAAGATGCATCCCCATCATTCTCTGACTATGAAAAGGTAGTACGATATAATTACAGTGCAGAGGAAAGGAAAGCACTGGTTGAACTTGTGAGCTACATAAAGAGTGTTGGATCTATGATGCAGCGGTGTGATACACTGGTTGCTGATGCTTTATGGGAAACAATACATTCTGAGGTACAAGATTTTGTCCAAAACACATTAGCTACTATGTTGCGGACTACCTTCAGAAAGAAGAAGGACCTCTCTAGGATTCTTTCAGATATGCGGACCCTTTCAGCTGATTGGATGGCTAATACAAACAAGTCAGAATCTGAGTTACAGTCCTCTCAGCATGGAGGTGAAGAAAGCAAAGCAAACATATTTTATCCAAGAGCAGTTGCCCCAACTGCTGCTCAGGTGCACTGCTTGCAGTTCTTAATATATGAGGTGGTTTCTGGTGGTAACCTTAGGAGGCCAGGTGGACTCTTCGGCAATAGTGGCTCAGAAATCCCAGTTAATGATTTAAAACAGCTGGAGACATTTTTTTACAAGCTTGGTTTTTTCCTTCATATTTTAGACTACTCAGCGACTGTCGCAACATTGACAGATCTTGGTTTCTTATGGTTTAGAGAATTCTATTTAGAGTCTTCACGAGTCATTCAGTTTCCAATTGAATGCTCTCTTCCCTGGATGTTGGTGGATTGTGTACTTGAGTCACCAAATTCTGGTCTTCTCGAGAGTGTTCTGATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCCTTGGTGTTGCTGAAGCAACGATTTCTATACGATGAAATTGAGGCTGAGGTGGATCATTGTTTTGATATATTTGTTACAAAATTGTGTGAAACCATTTTCACATATTACAAAAGTTGGGCGGCAAGTGAATTGCTTGATCCTTCCTTCCTCTTTGCTTCAGACAATGCAGAAAAGTATGCTGTGCAACCCATAAGGCTCAATATGCTGCTTAAAATAACTAGAGTGAAGCTGCTTGGAAGGATGATTAATTTGCGAAGTTTGATCACTGAATGGATGAACAAGGTTTTCCGTGAAAATATTGAGTTTCTATTTGGTCGTTTTGAGTGTCAGGATCTGTGTGCCATAGTGGAATTAGAGAAGCTGTTGGATGTCTTAAAACATTCACATGAACTACTGTCTAGAGATCTTTCTGTAGACTCTTTTAGTCTCATGTTGAACGAGATGCAAGAGAACATTTCCCTTGTATCATTTTCTAGTCGACTTGCCTCACAGATTTGGTCTGAGATGCAAAGTGATTTTTTGCCAAATTTCATTCTCTGCAATACTACTCAACGTTTTATCAGATCATCAAGGACTGTTCCTGTTCAAAAGCCATCAGTACCCTCTGTGAAGCCTAGTTTCTATTGTGGTACTCAAGATTTGAATTCTGCCCATCAAAGTTTTGCACGACTGCATAGTGGATTCTTTGGAATACCTCACATGTTTTCTGTTGTTCGACTTCTGGGATCCCGATCATTACCTTGGCTTATTAGAGCCCTTCTTGATCACATATCAAACAAGATTACTTTGCTTGAACCAATGATTACAGGATTACAAGACTCTTTGCCAAAATCAATTGGGCTTCTTCCTTTTGATGGAGGTGTGACAGGTTGCGTGAGACTCGTTAAGGAGCATCTTAACTGGGAGACAAAATCAGAGCTGAAAGCTGAGGTTCTTCATGGCATAAAAGAGATTGGAAGTGTATTATATTGGATGGGGCTTCTAGATATTGTGTTGAGAGAAAAGGATTCTATGGATTTCATGCAAACTGCTCCCTGGCTGGGCTTGCTTCCTGGAGCAGATGGTCAAATAGCAACTTCTCAAGATGGTGGAGACAGCCCTGTTGTTAGTTTGTTTAAATCAACAGCTGCTGCAATGGTTTCATACCCTGGTTGTCCATCACCCACCTCTTTCCACATTATGTCAAAACAAGCAGAAGCTGCAGATCTTTTATACAAGGCTAACTTGAACACTGGAAGTGTGCTGGAGTATGCACTTGCTTTCACTAGTGCTGCGTTGGACAAGTATTGTAATAAATGGAGTGCTGCACCCAAAACAGGCTTCATTGACATTACAATTTCTAAAGATTTCTATCGAATTTACAGTGGTCTCCAAATTGGATACTTGGAAGAGTCTGCCCAAGTGCCATCAAATAGTCATGAAAGGCTGGGAGATTCAGTTGCTTGGGGGGGATGCACTATAATTTATTTGCTTGGGCAGCAGCTGCATTTTGAGCTCTTTGACTTTTCATATCAGATCCTCAATATCGCAGAAGTGGAGGCTGCATCTGTTATGCAAACACATAAGAACTCACAATTTTCTGTGAAGGGATGGGAAGCCTTATTGGAAGCAATGAAAAAAGCAAGGAGATTAAATAACCATGTATTTTCTATGCTTAAAGCACGTTGCCCCCTTGAAGAAAAGACAGCTTGCGCTATTAAGCAAAGTGGTGCTCCAATACATCGTATAAAATTTGATAACACAGTTTCAGCATTTGAAACACTGCCGCAGAAAGGTTCTTAA 5301 0.3797 RLYELGARRVLVTGTGPLGCVPAELAQRSRNGECAAELQEASALFNPQLVQLVNQLNSEIGSVVFISANAFESNMDFISNPQAYGFVTSKHHNIVVHIENCCDSVWRNVVAALRRRGYVVYVIVIVIGAWAAEIIPNCISFIQLALGVEAKARAFFVFGDSLVDSGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDLISERIGGESVLPYLSPQLKGENLLNGANFASAGIGILNDTGSQFLNIIRMYRQLDYFEEYQQRVSILIGVARAKKLVNQALVLITVGGNDFVNNYYLVPYSARSRQYSLQDYVKFLIVEYRKLLMRLYDLGARRESNGIQEAVERRSHFIHLNEAKTVKDGKEAVDLCRSGENFDIIFMDKEMPIMDGHEATKHLSAMGVKSIIVGITTRADGKDKEEFLASGSNHCFEKPLDQAKRVVEVERERNEAIELAMAVPVEEAIAALSTFSLEDEQPEVQGPGVWVSTERGATESPIEYSDVSAYRLSLSEDTKALNQLNALTQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREIQRWQASASSKLAADMQRFSRPERRINGPTISHLWCVIMIYAFVVGFCYCCCFVFFIFSVLDCRSMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSGQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFVVESLELDFALLFPERHILLRVLPVLVVLVTSSEKDSESLYKRVKINRLINIFKNEAVIPAFPDLHLSPAAILKELSTYFPKFSSQTRLLTLPAPHELPPREAQEYPPNCFIHYLIINHIGAIRAEHDDFVIRFASAMNQLLLLKSTDGSDVEWSKEVKGNMYDMIVEGFQLLSRWTARIWEQCAWKFSRPCKDASPSFSDYEKVVRYNYSAEERKALVELVSYIKSVGSMMQRCDTLVADALWETIHSEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTNKSESELQSSQHGGEESKANIFYPRAVAPTAAQVHCLQFLIYEVVSGGNLRRPGGLFGNSGSEIPVNDLKQLETFFYKLGFFLHILDYSATVATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETIFTYYKSWAASELLDPSFLFASDNAEKYAVQPIRLNMLLKITRVKLLGRMINLRSLITEWMNKVFRENIEFLFGRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSRLASQIWSEMQSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSVKPSFYCGTQDLNSAHQSFARLHSGFFGIPHMFSVVRLLGSRSLPWLIRALLDHISNKITLLEPMITGLQDSLPKSIGLLPFDGGVTGCVRLVKEHLNWETKSELKAEVLHGIKEIGSVLYWMGLLDIVLREKDSMDFMQTAPWLGLLPGADGQIATSQDGGDSPVVSLFKSTAAAMVSYPGCPSPTSFHIMSKQAEAADLLYKANLNTGSVLEYALAFTSAALDKYCNKWSAAPKTGFIDITISKDFYRIYSGLQIGYLEESAQVPSNSHERLGDSVAWGGCTIIYLLGQQLHFELFDFSYQILNIAEVEAASVMQTHKNSQFSVKGWEALLEAMKKARRLNNHVFSMLKARCPLEEKTACAIKQSGAPIHRIKFDNTVSAFETLPQKGS 1766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02321 1766 Pfam GDSL-like Lipase/Acylhydrolase 156 338 IPR001087 GO:0016788
Gma03g02321 1766 Pfam GDSL-like Lipase/Acylhydrolase 2 82 IPR001087 GO:0016788
Gma03g02321 1766 Gene3D SGNH hydrolase 146 338 IPR036514 -
Gma03g02321 1766 Gene3D SGNH hydrolase 1 114 IPR036514 -
Gma03g02321 1766 SMART REC_2 338 446 IPR001789 GO:0000160
Gma03g02321 1766 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 1622 1638 IPR008081 GO:0030833|GO:0031267
Gma03g02321 1766 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 1179 1201 IPR008081 GO:0030833|GO:0031267
Gma03g02321 1766 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 1112 1130 IPR008081 GO:0030833|GO:0031267
Gma03g02321 1766 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 925 943 IPR008081 GO:0030833|GO:0031267
Gma03g02321 1766 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 1237 1267 IPR008081 GO:0030833|GO:0031267
Gma03g02321 1766 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 742 757 IPR008081 GO:0030833|GO:0031267
Gma03g02321 1766 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN 2 467 619 - -
Gma03g02321 1766 CDD REC_hyHK_CKI1_RcsC-like 358 440 - -
Gma03g02321 1766 Gene3D - 340 453 - -
Gma03g02321 1766 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED 467 619 IPR008081 GO:0030833|GO:0031267
Gma03g02321 1766 Pfam Response regulator receiver domain 356 440 IPR001789 GO:0000160
Gma03g02321 1766 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED 639 1738 IPR008081 GO:0030833|GO:0031267
Gma03g02321 1766 SUPERFAMILY CheY-like 360 439 IPR011006 -
Gma03g02321 1766 Coils Coil 436 456 - -
Gma03g02321 1766 Pfam Cytoplasmic Fragile-X interacting family 888 1725 IPR008081 GO:0030833|GO:0031267
Gma03g02321 1766 ProSiteProfiles Response regulatory domain profile. 318 449 IPR001789 GO:0000160
Gma03g02321 1766 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN 2 639 1738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02321 Gma-Chr3 48421900 48478205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02321 2 86 Acyl Lipid Metabolism Gene Families AT4G10950 38.372 2.57e-10 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma03g02321 FragX_IP 0 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02321 K05749 - gmx:100814483 2491.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02362 19 52229936 52236856 Gma03g02321 03 48421900 48478205 GST