Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02314 atggaacctaatgacaaccaactcacctctttcttccaccaccaccaccaacagcaccaacaccaccagccgccgccaccaccgcagaccacggcgtctccgaccaacgggctcttgccgaacgcggatgggtcccacatactttacccccactctgtggcgtccgctgtttcgtcgcagcttgaaccggcgaagcggaagcgcgggcggccgaggaagtacggaacgccggagcaagctctggccgcgaagaaagccgctacgacgttgtctcattcgttctctgtggacaagaagccccactccccgacgttcccttcctccaagaaatcccattccttcgctctagGCAATGCAGGGCAAGGGTTCACTCCGCATGTCATTTCTGTTGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGTTATTTATGCAACAAAGTAGGCGTGAGATGTGTATTCTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTTCGCCAGCCAGCAACCTCAGGAGGCAGCATTGCATATGAGGGTCGGTTTGAGATTATTTCACTTACTGGTTCTTATGTCCGTAATGAACTTGGAACTCGAACTGGTGGTCTCAGTGTATGCTTATCTAATACTGATGGACAAATCATAGGTGGTGGAGTTGGTGGGCCGCTTAAAGCAGCTGGTCCAGTTCAGGTCATCGTTGGAACATTCTTTATTGACAACAAGAAGGATACTGGTGCTGGTGTTAAAGGTGACATCTCTGCCAGCAAGTTGCCATCTCCAGTTGGTGAACCGGTATCAAGTTTAGGTTTCCGCCAATCAGTTGACTCTCCCAGTGGTAATCCAATCCGGGGAAATGATGAGCATCAAGCTATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCATGGGACGCCTCCCCGGTCCACAGACTGGGGTCATCCGGATTCAAGAAATACTGGTTTTGAGTTGACAGGAAGGATAGGTCATGGGGCGCACCAGTCTCCTGAGAATGGAGGCTATGAACAAATTCCCGATTGA 1041 0.316 MEPNDNQLTSFFHHHHQQHQHHQPPPPPQTTASPTNGLLPNADGSHILYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATTLSHSFSVDKKPHSPTFPSSKKSHSFALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGSIAYEGRFEIISLTGSYVRNELGTRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKDTGAGVKGDISASKLPSPVGEPVSSLGFRQSVDSPSGNPIRGNDEHQAMGGSHFMIQQLGLHGTPPRSTDWGHPDSRNTGFELTGRIGHGAHQSPENGGYEQIPD 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02314 346 CDD DUF296 124 235 IPR005175 -
Gma03g02314 346 MobiDBLite consensus disorder prediction 303 346 - -
Gma03g02314 346 MobiDBLite consensus disorder prediction 86 112 - -
Gma03g02314 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 235 IPR005175 -
Gma03g02314 346 MobiDBLite consensus disorder prediction 268 282 - -
Gma03g02314 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 338 - -
Gma03g02314 346 MobiDBLite consensus disorder prediction 1 112 - -
Gma03g02314 346 ProSiteProfiles PPC domain profile profile. 119 259 IPR005175 -
Gma03g02314 346 Gene3D - 125 249 - -
Gma03g02314 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 338 IPR039605 GO:0003680
Gma03g02314 346 MobiDBLite consensus disorder prediction 250 288 - -
Gma03g02314 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 121 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02314 Gma-Chr3 48343388 48349295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02314 43 346 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 52.836 8.44e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02314 - - gmx:100809675 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02314 03 48343388 48349295 Gma03g02314 03 48343388 48349295 ECH
Gma19g02351 19 52110708 52116676 Gma03g02314 03 48343388 48349295 GST