Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02311 ATGGAACAATCGCTTTTGGATGACATAATCAATCGCCTCCTCGAAGTTCCTACCCTACCGGCTAAGCAGGTTCAGCTATCCGAGTCCGAGATCCGTCAACTCTGCGTAGTTTCCAGAGAAATTTTCTTGCAACAACCTAATTTATTGGAGCTCGAAGCACCTATTAAGATTTGTGGTGATGTACATGGGCAATATTCTGATCTTTTAAGGCTTTTTGAGTACGGTGGATTACCTCCTGAAGCCAACTATTTGTTTTTGGGGGATTATGTTGATCGAGGGAAGCAGAGTTTAGAAACAATTTGCCTCCTCCTTGCTTATAAAATAAAATATCCTGAGAACTTTTTCTTGTTAAGGGGAAACCATGAATGTGCTTCTATAAACCGGATATATGGATTTTATGATGAGTGCAAGAGAAGGTTCAATGTAAGGTTATGGAAGACATTTACAGACTGCTTCAATTGCCTGCCTGTGGCAGCCCTTGTCGATGAAAAGATTTTGTGTATGCATGGGGGACTTTCTCCCGACTTAAATAATTTGGACCAAATTAGAAATTTACAGCGGCCCACAGATGTTCCTGATACAGGTTTGCTTTGTGATCTGCTTTGGTCTGACCCGAGCAAAGATGTTCAAGGATGGGGAATGAATGACAGAGGAGTTTCATACACATTTGGTGCTGATAAGGTCTCACAATTTCTTCAGAAACATGATCTTGATCTTGTTTGTCGTGCTCATCAGGTTGTGGAAGATGGATACGAGTTCTTTGCTAATCGACAACTTGTAACAATATTTTCAGCACCTAATTATTGTGGGGAGTTTGACAATGCTGGTGCTATGATGAGTGTTGATGAGACGCTAATGTGTAAAGGTTGGAAGATATTAGTCCTTCCTGGATGCGAAAGTGTGAAATTAAATTTGGCTAAAAGATTGCTACTACTACGGATCAGCTTGGGCTTGAACTCCTAA 963 0.4081 MEQSLLDDIINRLLEVPTLPAKQVQLSESEIRQLCVVSREIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLNNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADKVSQFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCKGWKILVLPGCESVKLNLAKRLLLLRISLGLNS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02311 320 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Gma03g02311 320 Gene3D - 1 293 IPR029052 -
Gma03g02311 320 SUPERFAMILY Metallo-dependent phosphatases 21 288 IPR029052 -
Gma03g02311 320 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Gma03g02311 320 SMART pp2a_7 26 296 IPR006186 GO:0016787
Gma03g02311 320 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Gma03g02311 320 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Gma03g02311 320 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Gma03g02311 320 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Gma03g02311 320 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Gma03g02311 320 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Gma03g02311 320 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Gma03g02311 320 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Gma03g02311 320 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 292 - -
Gma03g02311 320 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 292 - -
Gma03g02311 320 CDD MPP_PP1_PPKL 6 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02311 Gma-Chr3 48322648 48327642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02311 19 242 Calmodulin-binding Proteins AT5G63870 29.588 7.58e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02311 K06269 - gmx:100808597 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02348 19 52080397 52086635 Gma03g02311 03 48322648 48327642 ECH
Gma03g02311 03 48322648 48327642 Gma03g02311 03 48322648 48327642 ECH
Gma19g02348 19 52080397 52086635 Gma03g02311 03 48322648 48327642 GST