Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02303 atgacgagaactccttgttgtgagagaatgggattgaagaagggaccttggactgctgaagaagatcagatattggtttctcatattcaacgatatggccatggaaactggcgtgcgcttcctaaacaagctgGTTTGTTAaggtgtggcaagagttgtaggcttcgttggataaattacttgaggccagatattaaacgagggaaattcagcaaggaagaagaggataccatcctaaagctacatggaattcttggaaacagATGGTCTGCTATAGCGGCAAGTTTGCCCGGAAGAACAGACAACGAAATAAAGAATTTTTGGCATACCCATTTGAAGAAGAGGATCCAGAAAAGTGGAGTGCACAATGGCAATCCTTCCTCACGTATCTTGCAAGAGGCACAAGCAAATACTAGTTCGAATGCATCAAGTGTAATGATTGCCAATTACGGTTTACCCTCAAGGAATATTAATCCACCTATTGCAGGATTTTACGGTGCAGTCTCCTCAGATACTTTTGGAGAAATTAAGGACAATCATGGTTCTTGTCAGCTCAGTGAAGAAATGGAATTTTGGTACAATATATATTCATCAAATCAGGGCAAACATCATGAGACAATGGAAATCTAG 630 0.2349 MTRTPCCERMGLKKGPWTAEEDQILVSHIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEDTILKLHGILGNRWSAIAASLPGRTDNEIKNFWHTHLKKRIQKSGVHNGNPSSRILQEAQANTSSNASSVMIANYGLPSRNINPPIAGFYGAVSSDTFGEIKDNHGSCQLSEEMEFWYNIYSSNQGKHHETMEI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02303 209 CDD SANT 69 112 IPR001005 -
Gma03g02303 209 Gene3D - 68 143 - -
Gma03g02303 209 CDD SANT 16 61 IPR001005 -
Gma03g02303 209 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma03g02303 209 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma03g02303 209 Pfam Myb-like DNA-binding domain 17 76 - -
Gma03g02303 209 Gene3D - 13 66 - -
Gma03g02303 209 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Gma03g02303 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma03g02303 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma03g02303 209 PANTHER MYB TRANSCRIPTION FACTOR 1 201 - -
Gma03g02303 209 SMART sant 66 114 IPR001005 -
Gma03g02303 209 SMART sant 13 63 IPR001005 -
Gma03g02303 209 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02303 Gma-Chr3 48229483 48230759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02303 1 200 MYB Transcription Factor Family AT2G31180 49.580 3.90e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma03g02303 Myb_DNA-bind_6 1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02303 K09422 - gmx:778176 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02340 19 52002684 52004052 Gma03g02303 03 48229483 48230759 GST