Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02298 ATGTCTACATCTTCTCGTGTTCTTCCCACTCCATTGGAAAACAAGTATATGAAACCCCCAGATTCTTTTCAGCTTTCGCCAGTCAGAGATCTGACTGCAAATTCAGCCTCATCAAATTCAATCAGAAGTGCTGGGAAGATGTTTTCTTCACCTTCTAAATGTCCCGATGACTTCCCTTTTTCCTCTGTTTCACAGCATGATAGGCAATATCAAGATCCCCCCTTTGTTTCTCAGACAATTGGTGATAGCGTGTCTTCCGAAATACATTCAATGACATTCATTTCTCACCCTCAAGAAAATGAAGATCTTTCCTGGGGACCAGATCCATGTCAGGATATTCTTGGCTTTCCTGAAAATGTTTCTGTCCAGCATGATCAGGTGGAAAACAATGGTTGTTACATAAATGATGATAATGTCAAAAGATCTGATTTTGGGGAGTGGGTTGATCAGTTAATGTCAATTGATGATTCTCTTCACCCGAGCTGGAGTCAGCTTCTTGCTGATGACAATGTAGCAGAACCAAAACCAAAGGCATCTCAGGTTCCTCCGCAGCAGCATATACCATCTGGAGAAGTTGTTGGTAATTCAGCATCAACTGCATCGCAGACTAAGGCTAGAATGCGTTGGACTCCAGAACTTCACGAGGCCTTTGTGGAAGCAGTTAATCACCTTGGTGGTAGTGAGAAGGCTACTCCAAAGGGTGTGTTGAATCAAATGAAAGTTGAAGGTCTTACTATCTATCATGTAAAAAGCCACTTGCAGAAGTATAGAACTGCCAGATACAAACCAGAGCCATCAGAAGGAACGTCTGAGAAAAAGGTGACTCCAATGgaagaaatgaaatctctagacttgaaaacGAGTAAGGGGATCACTGAAGCATTACGTTTACAGATGGAACTCCAGAAGCGACTTCACGAACAACTTGAGATCCAAAGAAAGTTGCAGATTCAAATTGAAGACCAAGGGAAACGTCTTCAGATGATGTTTGAGAAACAGAGAGAGATGGGTGACAGCAAGGTTAACGTCTCCTTGGACGAGCCTTCTGCTGCTGCACCATCAGAAACAGTAGAAACCACAAATGAGGAACGCCACAAATTTGAAAGCATTCCAAAAGCCATACCCGAAGAGAAGGAGTCAAGCACAACAAAACAAATTGCAGGTGAAGCTGAAGAAATGATCAAGGAAGATGAAGTTGCACCACCCACAAAACGGGTGAAAAGTTCGTAA 1230 0.4187 MSTSSRVLPTPLENKYMKPPDSFQLSPVRDLTANSASSNSIRSAGKMFSSPSKCPDDFPFSSVSQHDRQYQDPPFVSQTIGDSVSSEIHSMTFISHPQENEDLSWGPDPCQDILGFPENVSVQHDQVENNGCYINDDNVKRSDFGEWVDQLMSIDDSLHPSWSQLLADDNVAEPKPKASQVPPQQHIPSGEVVGNSASTASQTKARMRWTPELHEAFVEAVNHLGGSEKATPKGVLNQMKVEGLTIYHVKSHLQKYRTARYKPEPSEGTSEKKVTPMEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQMMFEKQREMGDSKVNVSLDEPSAAAPSETVETTNEERHKFESIPKAIPEEKESSTTKQIAGEAEEMIKEDEVAPPTKRVKSS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02298 409 MobiDBLite consensus disorder prediction 358 409 - -
Gma03g02298 409 MobiDBLite consensus disorder prediction 182 196 - -
Gma03g02298 409 MobiDBLite consensus disorder prediction 27 47 - -
Gma03g02298 409 Pfam Myb-like DNA-binding domain 206 257 IPR001005 -
Gma03g02298 409 SUPERFAMILY Homeodomain-like 202 258 IPR009057 -
Gma03g02298 409 Pfam MYB-CC type transfactor, LHEQLE motif 291 335 IPR025756 -
Gma03g02298 409 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 204 258 IPR006447 GO:0003677
Gma03g02298 409 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 409 IPR044848 GO:0003700
Gma03g02298 409 MobiDBLite consensus disorder prediction 173 196 - -
Gma03g02298 409 MobiDBLite consensus disorder prediction 1 53 - -
Gma03g02298 409 MobiDBLite consensus disorder prediction 344 409 - -
Gma03g02298 409 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 409 - -
Gma03g02298 409 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 261 IPR017930 -
Gma03g02298 409 Gene3D - 203 262 - -
Gma03g02298 409 Coils Coil 292 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02298 Gma-Chr3 48194985 48199201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02298 9 378 G2-like Transcription Factor Family AT4G28610 43.257 4.75e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma03g02298 Myb_DNA-binding 3.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02298 - - gmx:100803267 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02334 19 51960755 51964855 Gma03g02298 03 48194985 48199201 ECH
Gma03g02298 03 48194985 48199201 Gma03g02298 03 48194985 48199201 ECH
Gma19g02334 19 51960755 51964855 Gma03g02298 03 48194985 48199201 GST
Gma03g02298 03 48194985 48199201 Gma10g00372 10 3548067 3554404 PCT
Gma03g02298 03 48194985 48199201 Gma13g01069 13 24858690 24863146 PCT