Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02294 ATGTCTGGCGCAGGTGTTGGTTTTGCTAGTGGAATAATAAGCCTTGGAAGACTAGAAGTTTTAAAAGTAAGAAAGTTTGAGAGAGTTTGGAGCTGCCCAAGTTCGCATGGTAAATCATCGGGTCATGTATTTTACAAACCTTTAGAGATTCCAGATGATTTTTCCTGCCTAGGTCACTATTGCCAGTCCAGTGATCAGCCATTAAGAGGACATGCTCTCGTGGCTCGTGAAACTTGTTCTGAACCTGAAGCCGAATCTCCAGCTCTTAAAAAACCAATTAACTACTCTTTGATATGGAGTGCTGATTCACCACATGATGGATGTGGTTATTTTTGGTTGCCAAATCCTCCACTCGGACACAAAGCAATGGGCTTAGTAGTTACTAACAAACCAGATGAACCTGAAGTTGAAGAAGTTTGGAACACAAGGGCATGCAAAAGAGGGACGCGGGGTAGAGGTGTATCAGTCGGGACATTCTTCTGCAGCACCTATTCTAATAACTCTGGAAAAATAGCAGATATTGCTTGCTTGAAGAATCTTGACTCCACCTTACATGCCATGCCAAACATAAACCAAGTTCATGCACTCATCAATCATTATGGCCCCACTGCATACTTCCACCCTGATGAGTATACTTGCCATCATCAGTGCAATGGTTTTTCAAGAAAGGAGCACTTGCATATTCAACAGACAGTGAGAAGGCTCTGGGAGGAGCAAAGTTTCCCTCATCCTGGGAGCTACCTTCAGGGATCATCCACACTTGGAATAGGAGCAAAGAATGAAGCAGCTAGAAGTAAACTAACAGTGGATTCCAGCACCAGATACAAGGTTGTTGCGGCTGAGTATCTTGGTGAGGGAGCTATTGCTGAAACATGGCACTCTCTGCATCTTCCTGTACTGTATCAAGACGCAATCAACGCAATGGATTGGGCTTTTGTGCATAAAACCTGGGATAAGTGGGCTTCTACGAACATTGGTTATTCTGGTCATCCGTTAAAAGCTGCTTTGCTTATTAATTATGACCCGACTGGACCATCTCGATTATTATCTACCATTGCTGAGCAAGAAGGGATGAGAGCCAATCCCATTGAATTGAGTCACTTTGTGGACTTCATCAAACAAAATAAACTCCAGACAGAGCTCTTCATTATTGGGTCCAATCAGTACTTGATCACGTCAATTCATGAGAACTGGTTTAGTGCAAGGTGTATAAACACATCAAAGCCTGCTGGTGAAGGTGCTATTGTTATACAAACAGCAGCTTATATCTTGGTTGCTATGTACGAAGGTTCCATTGGTCCAGCATCTAGGGCTATGGCAGCTGCTGATCAGTTAACTTGGCAATTAGGGCGAAAAAATCTTTAA 1365 0.4308 MSGAGVGFASGIISLGRLEVLKVRKFERVWSCPSSHGKSSGHVFYKPLEIPDDFSCLGHYCQSSDQPLRGHALVARETCSEPEAESPALKKPINYSLIWSADSPHDGCGYFWLPNPPLGHKAMGLVVTNKPDEPEVEEVWNTRACKRGTRGRGVSVGTFFCSTYSNNSGKIADIACLKNLDSTLHAMPNINQVHALINHYGPTAYFHPDEYTCHHQCNGFSRKEHLHIQQTVRRLWEEQSFPHPGSYLQGSSTLGIGAKNEAARSKLTVDSSTRYKVVAAEYLGEGAIAETWHSLHLPVLYQDAINAMDWAFVHKTWDKWASTNIGYSGHPLKAALLINYDPTGPSRLLSTIAEQEGMRANPIELSHFVDFIKQNKLQTELFIIGSNQYLITSIHENWFSARCINTSKPAGEGAIVIQTAAYILVAMYEGSIGPASRAMAAADQLTWQLGRKNL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02294 454 PANTHER - 138 213 - -
Gma03g02294 454 PANTHER - 239 291 - -
Gma03g02294 454 PANTHER - 5 139 - -
Gma03g02294 454 PANTHER - 5 139 - -
Gma03g02294 454 PANTHER - 138 213 - -
Gma03g02294 454 PANTHER - 239 291 - -
Gma03g02294 454 Pfam Profilin 316 449 IPR005455 GO:0003779
Gma03g02294 454 SUPERFAMILY Profilin (actin-binding protein) 317 447 IPR036140 -
Gma03g02294 454 Gene3D Dynein light chain 2a, cytoplasmic 316 453 - -
Gma03g02294 454 Pfam Vacuolar protein sorting-associated protein 62 138 211 IPR009291 -
Gma03g02294 454 Pfam Vacuolar protein sorting-associated protein 62 240 291 IPR009291 -
Gma03g02294 454 Pfam Vacuolar protein sorting-associated protein 62 5 139 IPR009291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02294 Gma-Chr3 48165688 48171642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02294 307 454 Carbohydrate Esterase AT4G19410 68.456 4.80e-67 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02294 - - gmx:100802211 301.982