Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02291 ATGCAGGGGACTCCAGTGAACATTATTGCGGGTTCTCATGTCTGGGTTCAAGATCCACAAGTATGTTGGATTGATGGACAGGTATCCAAAATCATCAAAGGAAATGATGCTGAAATTGAAGCAACCAATGGAAATAAGGTTGTCGCAAAGTTATCAAATATATATCCCAAAGATACAGAAGCTCCTCCGGGTGGAGTGGATGACATGACTAAGCTTTCCTATTTGCATGAGCCTGGAGTCCTCCAGAACTTAAAAACTAGATATGAACTGAATGAAATATACACTTATACGGGAAATATTCTGATTGCAATAAATCCATTTCAAAGACTACCTCATATTTATGATTTGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTGAGTCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCAATGATTAATCACGACGGGAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACCGAAACTACAAAAATGCTTATGCGCTACCTTGCTTTCTTAGGAGGTAGGGCTGTCACTGAAGGACGAACCGTTGAACAACAAGTTCTTGAATCAAATCCTGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCCATTCGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAGATTAATGATCCTGAACGAAACTACCACTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGAAATCCCAAAACGTTTCATTACCTTAACCAGTCAAAATGCTATGAACTGGATGATATAAATGATTCCCGTGAGTATCTTGCTACCAGGAGAGCTATGGATATTGTCGGAATAAGCCAAAATGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATATAGGGAATATTGATTTTGCCAAAGGAAGGGAAGTTGATTCATCAGTTCCAAAAGATGACAAAGCCAAATTCCACTTAAAAACAACTTCTGAGCTTCTTATGTGCGATGTTCGTGCCTTGGAAGATGCATTATGTAAGCGTGTCATGATAACCCCTGAGGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAGCAATCAGCAGAGATGGCTTAGCAAAAACAATTTATTGTAGGCTCTTTGACTGGTTGGTGAACAAGATTAATAGTTCAATCGGACAAGACTCCAATTCTAAATCTTTGATTGGGGTGCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTCTTATGACCATCTTTTCTCTGCTTAAACATTTTTTTTGTGAATTCCAGCACGTGTTTAAGATGGAACAAGAAGAATACAAGAAGGAGCAAATCGATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATAATTGCACTCCTTGACGAAGCTTGCATGTTTCCAAAGTCTACACACGAAACATTTTCAAACAAGCTTTATCAAACATTTAAGAATAATAAGCGCTTTATTAAGCCAAAATTGTCTCGAACAGATTTCACTATTTCTCATTATGCTGGCGAGGTGCAGTACCGGTCTGACCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGGGTGCTTCCAAATGTCCTTTTGTAGCTGGCCTTTTTCCTCCACTTCCAGAAGAGACATCGAAGTCTTCCAAGTTTTCTTCAATTGGTTCTAGATTTAAGCTGCAACTACAGCAATTAATGGAAATACTAAGCTCTACAGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCAGCAATTTTTGAGAATGCCAATATTATACAACAACTTCGCTGTGGTGGTGTTTTGGAAGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTGCTTTCTTTGAATTTGTAAACCGATTTTCCCTTCTTGCTCCAGATGTCACAGAAGCACACCATGATGAGAAGATTGTTTGCCAAAAGATACTGGAAAAAGCGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGAGCAGGTCAGATGGCTGAACTAGATGCACAGAGAGCTAAAAAACTCAGTAATGCAGCAAAAACTATCCAACGGCGTATACGAACCCATCAAGCTCGCAAACATTATCTTGAACTACGAAACAAGACTATATATATGCAGTCTGTGTGCAGAGGAAGACTTGCATTCAAACTTTATCAACACAAGAGAAGGGAGGCGGCTGCTGTGAAAATTCAGAAGAACATACGCAGATATGAAGCTAGGAATACCTATATTAAACTCCAAGCATCAGTACTTACTTTGCAAACAGCTTTAAGGGCAATTGCTTCCCTCAAAGAGTTCAGATTTAGGAAACAGACTAAAGCTTCCATCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCTTCATATTATAAGAAGCTCAAGAAAGGTTCAATTGTCACACAATGCCGATGGAGGGGGCGCATGGGCAGAAAAGAACTTAGGAAAATGAAAATGGCTGCAAGAGAAACTGGCGCGCTTAAAGACGCAAAGGACAAGCTTGAAAAAAGAGTGGAGGATATCACTTGGCGTCTTCAACTAGAGAAAAGTTTAAGGACCAACCTAGAAGAATCCAAATCACAAGAGATAGCAAAACTGAAGAATGCACTGCAGGAGATGCAGAACAAAGTTGATGAATCCAATGCATTGCTTATAAAGGAGAGAGAGAATGCAAAGAAGGCCATTGAAGAAGCACCTCCTGTTGTTAAAGAAATTCAGGTTATTGTTGAAGACACTCAGAAGATTGAATCACTAACATTGGAAGTTGAGAGTCTAAAGACATCCCTTGAGTCGGAGAAACAGAAAGCTGACGAGAAATATAATGAAGCCCAAGCTTGTAGTGAAGAAAGGGGGAAAAAATTAGAAGACACAGAGAAGAAGGTTCGTCAACTCCAAGAATCCTTAGCCAGGCTAGAAGAGAAAATTACTAACTTAGAATCAGAGAATCAAGTTCTGCGTCAACAAGCCCTGTCCATGGCACCTAATAAGTTCCTCTCAGGACGCTCTAGATCAATCATTCGGAGAACGGACAGTGGACATCTTGGAGTTGAAGCAAAGACAACTTTGGATATGCATAGCACATCAATGAACCACAGGGAATCTTCGGAAGTGGAGGATAAACCACAGAAGTCACTAAATGAGAAACAACTAGAGAACCAAGACTTACTCATTAAATTCATTCCTAAACAGATAGGTTTTGCTGGGAATAGACCAATTGCTGCTTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGACCGTACTAGCGTTTTTGATCGTATAATTCAAACTATTGGGCATTCAATTGAGACCCAGGATAACAATGATGTTTTGGCTTATTGGTTATCCAACACCTCTACACTTGTCTTGTTACTCCAGCGCACACTTAAGGCAAGTGGTGCTGCTGGAATGGCTCCTCAACGACGTCGTTCTTCGTCAGGGACAGTGTTTGGGAGGATGACTCATAGTTTCCGTGGAACTCCAGCAGGAGTCAATCTTTCCCTAATCAATGGTAGCATGAGCGGAGGCATAGATGCGTCGAGACAAGTTGAAGCCAAGTACCCTGCTCTTCTTTTCAAACAGCAGCTCACAGCTTATGTGGAAAAGATATACGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGGTTATGCATCCAGGCGCCTAGAACATCCAGAGCGAGCTTTGTTAAGGGATCATCACGTTCAGCTGCAACCACTGAAGCCCAGAAAGCTTTGATTGGTCACTGGCAGGAGATAGTTAAGAGCCTTGGGAACTTTTTAAATACTTTGAAAGCAAATCATGTTCCCCCATTTTTGGTTCGTAAGGTGTTCACTCAAATTTTTTCCTTCATCAATGTCCAACTTTTCAATAGTCTTCTTCTAAGACGGGAGTGCTGCTCATTTAGCAATGGAGAATATGTGAAATCTGGTTTGGCTGAATTGGAGAATTGGTGTAATAATGCCACTGATGAGTACGCCGGTTCAGCTTGGGATGAGCTCAAACATATAAGACAGGCTATTGGATTTTTGGTCATACATCAGAAACCAAGGAAAACGCTGAATGAAATAACTCATGAACTGTGTCCAGTCCTGAGTATACAGCAGCTATATCGGATAAGCACCATGTACTGGGATGACAAGTATGGCACACATAGCGTATCCCCTGATGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCAGTTGATGACATATCGAAGTCGAAGGAACCCATAGATATCTCTGATATAGAGCCCCCACCAGTAATACGTGATAACACTGGCTTTAGTTTCTTGCTGCCACACCCAGACTGA 4584 0.4053 MQGTPVNIIAGSHVWVQDPQVCWIDGQVSKIIKGNDAEIEATNGNKVVAKLSNIYPKDTEAPPGGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDLHMMQQYKGAPFGELSPHVFAVADVAYRAMINHDGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAVTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGNPKTFHYLNQSKCYELDDINDSREYLATRRAMDIVGISQNEQEAIFRVVAAILHIGNIDFAKGREVDSSVPKDDKAKFHLKTTSELLMCDVRALEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYCRLFDWLVNKINSSIGQDSNSKSLIGVLDIYGFESFKSNSFLMTIFSLLKHFFCEFQHVFKMEQEEYKKEQIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNNKRFIKPKLSRTDFTISHYAGEVQYRSDQFLDKNKDYVVPEHQDLLGASKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMEILSSTEPHYIRCVKPNNLLKPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRAFFEFVNRFSLLAPDVTEAHHDEKIVCQKILEKAGLKGYQIGKTKVFLRAGQMAELDAQRAKKLSNAAKTIQRRIRTHQARKHYLELRNKTIYMQSVCRGRLAFKLYQHKRREAAAVKIQKNIRRYEARNTYIKLQASVLTLQTALRAIASLKEFRFRKQTKASIIIQARWRCHKAASYYKKLKKGSIVTQCRWRGRMGRKELRKMKMAARETGALKDAKDKLEKRVEDITWRLQLEKSLRTNLEESKSQEIAKLKNALQEMQNKVDESNALLIKERENAKKAIEEAPPVVKEIQVIVEDTQKIESLTLEVESLKTSLESEKQKADEKYNEAQACSEERGKKLEDTEKKVRQLQESLARLEEKITNLESENQVLRQQALSMAPNKFLSGRSRSIIRRTDSGHLGVEAKTTLDMHSTSMNHRESSEVEDKPQKSLNEKQLENQDLLIKFIPKQIGFAGNRPIAACIIYKCLLHWRSFEVDRTSVFDRIIQTIGHSIETQDNNDVLAYWLSNTSTLVLLLQRTLKASGAAGMAPQRRRSSSGTVFGRMTHSFRGTPAGVNLSLINGSMSGGIDASRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASFVKGSSRSAATTEAQKALIGHWQEIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKSGLAELENWCNNATDEYAGSAWDELKHIRQAIGFLVIHQKPRKTLNEITHELCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSKEPIDISDIEPPPVIRDNTGFSFLLPHPD 1527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02291 1527 Gene3D Myosin VI head, motor domain, U50 subdomain 315 602 - -
Gma03g02291 1527 ProSiteProfiles Myosin motor domain profile. 64 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 Gene3D - 255 313 - -
Gma03g02291 1527 PANTHER MYOSIN 7 1524 - -
Gma03g02291 1527 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Gma03g02291 1527 Pfam IQ calmodulin-binding motif 833 853 IPR000048 GO:0005515
Gma03g02291 1527 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Gma03g02291 1527 PANTHER MYOSIN-9 7 1524 - -
Gma03g02291 1527 SMART MYSc_2a 58 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 Coils Coil 913 951 - -
Gma03g02291 1527 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Gma03g02291 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 786 IPR027417 -
Gma03g02291 1527 SMART DIL_2 1345 1452 IPR002710 -
Gma03g02291 1527 Gene3D - 667 733 - -
Gma03g02291 1527 Gene3D - 442 624 - -
Gma03g02291 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 884 IPR027417 -
Gma03g02291 1527 ProSiteProfiles IQ motif profile. 736 763 IPR000048 GO:0005515
Gma03g02291 1527 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Gma03g02291 1527 SMART iq_5 735 757 IPR000048 GO:0005515
Gma03g02291 1527 SMART iq_5 854 876 IPR000048 GO:0005515
Gma03g02291 1527 SMART iq_5 783 805 IPR000048 GO:0005515
Gma03g02291 1527 SMART iq_5 758 780 IPR000048 GO:0005515
Gma03g02291 1527 SMART iq_5 831 853 IPR000048 GO:0005515
Gma03g02291 1527 Coils Coil 976 1049 - -
Gma03g02291 1527 CDD MyosinXI_CBD 1108 1493 IPR037975 GO:0007015
Gma03g02291 1527 Coils Coil 733 753 - -
Gma03g02291 1527 Gene3D Kinesin motor domain 67 663 IPR036961 -
Gma03g02291 1527 CDD MYSc_Myo11 78 721 IPR036018 -
Gma03g02291 1527 Pfam DIL domain 1346 1449 IPR002710 -
Gma03g02291 1527 PRINTS Myosin heavy chain signature 432 460 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 PRINTS Myosin heavy chain signature 199 226 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 PRINTS Myosin heavy chain signature 152 177 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 Gene3D - 734 785 - -
Gma03g02291 1527 Gene3D - 834 883 - -
Gma03g02291 1527 Gene3D - 786 833 - -
Gma03g02291 1527 Pfam Myosin head (motor domain) 66 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 ProSiteProfiles Dilute domain profile. 1157 1470 IPR002710 -
Gma03g02291 1527 Pfam Myosin N-terminal SH3-like domain 10 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Gma03g02291 1527 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma03g02291 1527 ProSiteProfiles IQ motif profile. 832 859 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02291 Gma-Chr3 48135720 48146406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02291 3 1527 Myosins gene family AT1G54560 79.661 0.0 2560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02291 K10357 - gmx:100816792 2597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02291 03 48135720 48146406 Gma03g02291 03 48135720 48146406 ECH
Gma03g02291 03 48135720 48146406 Gma10g00392 10 3716854 3734730 PCT
Gma03g02291 03 48135720 48146406 Gma13g01093 13 25058578 25077334 PCT