Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02274 ATGGAGGCAGAGCGAGACAAGTACAAGATGATCAACTTTGAAGAAACCGAGTTACGACTCGGCCTGCCACTCAGTGGAAACGAGACGCTCAAAAACACTTGCAGCACTGGGAAGAGGGTTTTTTCGGATACTGCCGTGGATTTGAAGCTTAACCTTTCCTCAACCTCAAATAGTGCTTCTTCTGACCTGGCTAAAGAGAAGAACATCACTGCTGCTGCACCTCCTGCTAACGACCCAGCAAAGCCACCTGCAAAGGCACAAGTGGTGGGGTGGCCACCAGTGAGGTCTTTCAGAAAGAACATTGTTCAAAGGAGTAACAACAATGAGGGCGAAAAAGCCGCCACAAGTAGTAGCAACAATGTGAACACGGGAGCAGCTTTCGTGAAGGTGAGCATGGATGGTGCTCCTTATTTACGCAAGGTGGATTTGAAGTTGTACAAGAGCTACCAAGAGTTGTTGGATGCGCTGGCTAAAATGTTCAGTTCATTCACCATTGACAAGTGTGGATCCCAAGGCATGAAAGACTTCATGAACGAGAGCAAATTGATTGATCTTCTCAACGGCTCTGATTACGTACCAACCTATGAAGACAAAGATGCTGACTGGATGCTCGTTGGTGACGTACCGTGGGAAATGTTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGAGGCAATCGGGCTAGCACCAAGAGCAGTGGAAAAGTGCAAGAACAGAAGCTAG 732 0.4768 MEAERDKYKMINFEETELRLGLPLSGNETLKNTCSTGKRVFSDTAVDLKLNLSSTSNSASSDLAKEKNITAAAPPANDPAKPPAKAQVVGWPPVRSFRKNIVQRSNNNEGEKAATSSSNNVNTGAAFVKVSMDGAPYLRKVDLKLYKSYQELLDALAKMFSSFTIDKCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDADWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKNRS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02274 243 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 236 IPR003311 GO:0005634|GO:0006355
Gma03g02274 243 PANTHER AUXIN-INDUCED PROTEIN AUX28 8 236 - -
Gma03g02274 243 Pfam AUX/IAA family 34 234 IPR033389 -
Gma03g02274 243 Gene3D - 119 237 - -
Gma03g02274 243 SUPERFAMILY CAD & PB1 domains 116 224 - -
Gma03g02274 243 ProSiteProfiles PB1 domain profile. 125 225 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02274 Gma-Chr3 48013328 48015961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02274 122 228 B3 DNA Binding Superfamily AT3G61830 32.710 1.36e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma03g02274 AUX_IAA 8.6e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02274 K14484 - gmx:100796888 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02311 19 51805503 51807996 Gma03g02274 03 48013328 48015961 ECH
Gma02g01298 02 15048424 15051821 Gma03g02274 03 48013328 48015961 ECH
Gma03g02274 03 48013328 48015961 Gma03g02274 03 48013328 48015961 ECH
Gma19g02311 19 51805503 51807996 Gma03g02274 03 48013328 48015961 GST