Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02271 ATGAATGAAATTCAAATACTAATTGTTGCTATCACAATTCACAAGAGATTGGATTTTGGAATGGAAAGGGTGTTGTCAGTAGATGAGATATCGGAGCAATACTGGGTGGCTGCATCATCTTCTTCATCATCATCATCATCATCGTTCAAGTCAAAGATGAACCGGAGCGAATCCGAATGGGCCTTTCAGCAGTTCCTACAGCAGGAAGCTGCTTCTTCTtcatctaattctgatcatgatgatgatcatcatcatgctaaACTCAAAAAGGAATCCAACACCAACATCCCTGTTACTCTACATGTTGATTCCCAAGACTACCATGCTATTCTTAAGACCAAGCTTAATCTCGCATGCGCTGCTGTTGCTATGACTCGGGGATCTTTGGTCAAATCTCAAAACCCTGACAGTGGACCACAGGCATCTAATTTTTCTGAAGTTGGATCGCATGCTACCTTAAAAGGATCTGGCCCTTTTGGAAATGATGATCCCTCTAAATTACAAAATAAAGATATCAAAGCACAAATTGGGATTCCTTCCTCACCTTCCATGCAAAACAAATCCGCTGTCGTCGCAATGAGGCCAACAATAAGTGGATCATCAGGAGAACAATCAGATGATGAGGAAGCGGAAGGAGAGATTAATATGACTGGAAACATGACTCCTGTTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCAGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTGGAGACACAGGTCTCCCAATTAAGAAGCGAAAATTCTTCATTGTTAAAGCGCTTCACGGATGTGAGCCAGAAATACAGTAATGCTGCAGTTGACAACAGAGTACTGAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACAGTGAAAAGAATTACTGGGTTGAGCCCAATGCTCCATGCCATGACTGAGATGTCATCACTGGGAATGCCATTGTTTGATGAAAGTCCTTCTGAGACATCAGCTGATGCTGCTGTTCCAGTGCAAGAAGACCCAAATCATCACCTTTGTCAACCCACTTCTAATAATGGGTTGGGAGGCATTTCTTCAATTGAAACTGTGCAGCAGAATGTTGCAGCAGTGGTAGGTGGCAACAAAATGGGGAGAACAACTTCCCTGCATAGAGTGGCTAGCCTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGCAGATTCACGTGGAACTCCTTCTAATTGA 1245 0.4209 MNEIQILIVAITIHKRLDFGMERVLSVDEISEQYWVAASSSSSSSSSSFKSKMNRSESEWAFQQFLQQEAASSSSNSDHDDDHHHAKLKKESNTNIPVTLHVDSQDYHAILKTKLNLACAAVAMTRGSLVKSQNPDSGPQASNFSEVGSHATLKGSGPFGNDDPSKLQNKDIKAQIGIPSSPSMQNKSAVVAMRPTISGSSGEQSDDEEAEGEINMTGNMTPVDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRSENSSLLKRFTDVSQKYSNAAVDNRVLKADVETLRAKVKMAEETVKRITGLSPMLHAMTEMSSLGMPLFDESPSETSADAAVPVQEDPNHHLCQPTSNNGLGGISSIETVQQNVAAVVGGNKMGRTTSLHRVASLEHLQKRIRGGADSRGTPSN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02271 414 Gene3D - 225 280 - -
Gma03g02271 414 SUPERFAMILY Leucine zipper domain 226 277 IPR046347 GO:0003700|GO:0006355
Gma03g02271 414 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 224 276 IPR004827 GO:0003700|GO:0006355
Gma03g02271 414 MobiDBLite consensus disorder prediction 130 167 - -
Gma03g02271 414 MobiDBLite consensus disorder prediction 75 91 - -
Gma03g02271 414 MobiDBLite consensus disorder prediction 71 92 - -
Gma03g02271 414 MobiDBLite consensus disorder prediction 130 150 - -
Gma03g02271 414 SMART brlzneu 222 286 IPR004827 GO:0003700|GO:0006355
Gma03g02271 414 Pfam bZIP transcription factor 225 278 IPR004827 GO:0003700|GO:0006355
Gma03g02271 414 PANTHER BASIC LEUCINE ZIPPER 63 21 398 - -
Gma03g02271 414 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 229 244 IPR004827 GO:0003700|GO:0006355
Gma03g02271 414 Coils Coil 235 269 - -
Gma03g02271 414 Coils Coil 284 304 - -
Gma03g02271 414 Pfam Basic leucine-zipper C terminal 293 406 IPR020983 -
Gma03g02271 414 PANTHER BZIP TRANSCRIPTION FACTOR 21 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02271 Gma-Chr3 47982915 47988055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02271 21 315 bZIP Transcription Factor Family AT4G02640 37.994 1.58e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma03g02271 bZIP_C 4.9e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02271 K25784 - gmx:778137 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02271 03 47982915 47988055 Gma03g02271 03 47982915 47988055 ECH
Gma19g02308 19 51771421 51776754 Gma03g02271 03 47982915 47988055 GST
Gma03g02271 03 47982915 47988055 Gma10g01596 10 43055342 43058496 PCT
Gma10g01596 10 43055342 43058496 Gma03g02271 03 47982915 47988055 PCT