Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02261 ATGGGGAAGGCCAGCAAATGGATCAGAAACTTCCTACTAGGGAAAAAAGAAGATAAAATAAAGAAGATCGATGCATTCTGCAGCGAGGATAAGAGTGGCAACACAGGGAGTCTGATTGTGAGTCCCAAAGTGAAGCGCAGATGGAGCTTCGGAAAACTAACAGGAGCAGGGCATAAATTTTCCAGATCATTTGACTCAGCTGACTCTGCAAAACTTCAAATACAAGCCTTGTTGGAAACCAAGACTCCAAGGCGTCTTCCAAAACCATTAGCAAAGCCTTCTAAAGATAAAAACAAAGCCGCTACAAAGATTCAGGCTAGCTTTCGCTCTTATTTGGCAAGGAGAGCATTGCATGCTTTAAGGGGATTAGTCAAGTTACAGGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCTACACTGCGTGGAATGCATGCGTTGATGGCCATACAAGTTAGAGCCCGAATTCACAGAGTTCAGATGGCAGAGGAAGCAAACCTCCTCCGACAACAATCGCCTCCGCAACATAGACAAGTTCCATACTCCACTGATCTCATAACAGAAGAAAATAAAGATTCAAACCATATGAGTGTGGAAGAAATGTTGGAGGTTTTGAAAAGCAGAAGTGGCCCACTAGATGGTTCATATGTTAAGGGCAGAGAGCGTGATTCCATGACATACTATTCCAAGCATGTGCCGGTTGTTTCTAAACGAGAAAACCAATACAAGAAAACTCTAATCATAGAACCAAACAGCCTAGAAAACTACCGATCCATGTCTGAATTTAACCCAACGACAATTGCCTTGTCAACTTCTCAGCGCCATTCAGTGCCTCACGGCCAATCACTGTCACCAAATTACATGAACAAGACAGAATCTTCAAGGGCTAAAGCAAGGTCGCAGAGTGAACCAAGACAACGACCAATACGGGGAACAAGGCACAAAGGCAAGTCTGTGGAATCACCATTGAATGGTCCAAGACAAAATCTGTTCTCAAACTCGTTACGCTTCGATCATGGAAGCATGGACCATTGGGTTATCAATTTTCATGGGTCAACGAACGACAGCAGGCGCAATTCCTTTGGCAGCAGCTCGGTTACTACTGATTCCTATTATTGA 1125 0.44 MGKASKWIRNFLLGKKEDKIKKIDAFCSEDKSGNTGSLIVSPKVKRRWSFGKLTGAGHKFSRSFDSADSAKLQIQALLETKTPRRLPKPLAKPSKDKNKAATKIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMAIQVRARIHRVQMAEEANLLRQQSPPQHRQVPYSTDLITEENKDSNHMSVEEMLEVLKSRSGPLDGSYVKGRERDSMTYYSKHVPVVSKRENQYKKTLIIEPNSLENYRSMSEFNPTTIALSTSQRHSVPHGQSLSPNYMNKTESSRAKARSQSEPRQRPIRGTRHKGKSVESPLNGPRQNLFSNSLRFDHGSMDHWVINFHGSTNDSRRNSFGSSSVTTDSYY 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02261 374 MobiDBLite consensus disorder prediction 352 374 - -
Gma03g02261 374 SMART iq_5 96 118 IPR000048 GO:0005515
Gma03g02261 374 SMART iq_5 119 140 IPR000048 GO:0005515
Gma03g02261 374 Pfam Protein of unknown function (DUF4005) 274 317 IPR025064 -
Gma03g02261 374 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Gma03g02261 374 MobiDBLite consensus disorder prediction 298 319 - -
Gma03g02261 374 ProSiteProfiles IQ motif profile. 121 148 IPR000048 GO:0005515
Gma03g02261 374 MobiDBLite consensus disorder prediction 273 332 - -
Gma03g02261 374 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 361 - -
Gma03g02261 374 Gene3D - 94 149 - -
Gma03g02261 374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 139 IPR027417 -
Gma03g02261 374 Pfam IQ calmodulin-binding motif 99 117 IPR000048 GO:0005515
Gma03g02261 374 Pfam IQ calmodulin-binding motif 124 138 IPR000048 GO:0005515
Gma03g02261 374 MobiDBLite consensus disorder prediction 273 297 - -
Gma03g02261 374 PANTHER IQ-DOMAIN 5-RELATED 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02261 Gma-Chr3 47919681 47921104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02261 1 163 IQD Protein Family AT4G14750 41.954 5.95e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02261 - - gmx:100527816 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02296 19 51687153 51688635 Gma03g02261 03 47919681 47921104 ECH
Gma03g02261 03 47919681 47921104 Gma03g02261 03 47919681 47921104 ECH
Gma19g02296 19 51687153 51688635 Gma03g02261 03 47919681 47921104 GST