Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02254 ATGAATGAGCTTGAAACAACAGATTCCTCTGCATCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATACGGCAGGTACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTATATAGAGCATTTGATGAGTACCAAGGGATTGAAGTTGCTTGGAATCAGGTTAAATTGTATGATTTTCTGCAGAGCCCTGAAGATCTCGAGAGGCTTTACTGTGAAATTCACCTCCTCAAGACGTTGAAGCACAGAAACATAATGAAATTTTACACATCTTGGGTTGATACAGCAAATAGAAATATCAACTTTGTGACTGAAATGTTCACTTCTGGCACCCTTAGACAGTATAGGCAAAAGCACAAGAGAGTTAACATTAGGGCAGTGAAGCATTGGTGTAGACAGATCCTGAGAGGGCTTCTCTATCTTCATAGCCATGACCCACCTGTGATCCATAGAGATCTTAAATGTGATAATATTTTTATCAATGGAAACCAAGGGGAAGTTAAGATTGGGGATCTTGGGTTGGCAGCAATTCTCCGCAAGTCCCATGCTGCTCATTGTGTAGGGACGCCTGAGTTCATGGCACCAGAAGTTTATGAAGAGTCATATAATGAATTAGTTGACATATATTCCTTTGGGATGTGTGTATTAGAGATGGTCACGTTTGAATATCCTTATAGCGAATGTAGCCATCCAGCACAAATCTACAAGAAAGTTATTTCAGGGAAGAAACCGGATGCCTTGTATAAAGTGAAGGATCCAGAAGTACGACAATTTGTTGAGAAATGCCTGGCAACGGTGTCTCTAAGGCTCTCTGCTAGGGAGCTTCTAGATGATCCTTTTCTTCAGATTGATGATTATGAGTATGATTTGGGACCCGTGGACAGTGGAGCATTTGATGACTTGGGTCCTCTTACCCATCAGCCATTCTTTGATCTCCACCAGAGTTTTAGTAACATGAGTACTGAATACTCAAATGGCTTCGAATATGGAGACTGGTATTCTCATCCAGCTGATATTGAACCTAGTGGAATTGAACTTTTCGAGTGCCATGATGAGGAAGCCTCTGAAGATGTTGACATAAGCATCAGAGGCAAGAGGAAAGATGACGGTGGCATCTTTTTGAGACTAAGAATTGCAGACAAAGAAGGCCATATTCGGAATATTTATTTTCCATTTGACATAGGGACGGACACAGCATTAAGTGTAGCAACTGAAATGGTTGCAGAACTCGACATTACTGATCAGGATGTTACCAGTATTGCAGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAAGCCGGGACCAGGAATTGAAGAAACCAACCATCATTTAAATAATTTTTTTTGTCACAATTGTGTGTCTATTCATACTTCGGGTGGCAATGTTATGGAATTTCTTTCACATAATCAATGTGGAAAGAACTCGCAACTTCCTCAATGCTGTAGGCATGGATGTACTTCAATGCATGGGCGTTTTGAGGAGATTACCTTCCCATCCGAGTGTGACAATCATGTTAGAGGGGATGCACCTATCAAATCAAGCCAATCAGACTGCTTGCAGCGTCAGGAATCATGGAATCATCATGAAAGTTGTGAACTGAGTCCAGTAGAGTCTGATGAAAGTCATTCTGGTGAGCAATTTGATAAACCAGTATTAGCAGAAGACAAAGGAAAAAAAGGCATTTGGGAAAACAAGTTCGCACATGATCCAGGAAATCCCCCACGAAGTTTATCAGGAAATTATTTCTCTGCTATCCGTTTTTTGTGTTGTGGCCCTGAGATTGAATATGAGAAAGAGGTTCGACAAGAAATGAGATGGATCAAAGCAAAACACAATAGGGAGTCAAGGGAACTTGGAGATAAACGGTTTGGTATAGCAACTGAATCTTCACATACTAGTAATAGAGAGCACAAAACTGAACAATGCATTATGCCACCACTGCCACAGACAGCAAACGGTGTGCACAATGGGATTCACTTGAAACCCTTAGGTAATATCTGGAATTATGAATCCAGTTGCCGTTCTCAAGTCCAAAAGAACCACCCCAATTTGGACACCCAAAGGGCCCAAAATTGTGAGGTGATGTGTTCTCACAAAGAAGGTATGGTTACTGAGAAGAGTTTTTACACAGGCTCGCTTAGAGACACTCTACACAGGACAGTTTCCCTTCCTGTTGATGCTGTGGATGTTTAG 2205 0.415 MNELETTDSSASEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRQKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDYEYDLGPVDSGAFDDLGPLTHQPFFDLHQSFSNMSTEYSNGFEYGDWYSHPADIEPSGIELFECHDEEASEDVDISIRGKRKDDGGIFLRLRIADKEGHIRNIYFPFDIGTDTALSVATEMVAELDITDQDVTSIADMIDGEIASLVPEWKPGPGIEETNHHLNNFFCHNCVSIHTSGGNVMEFLSHNQCGKNSQLPQCCRHGCTSMHGRFEEITFPSECDNHVRGDAPIKSSQSDCLQRQESWNHHESCELSPVESDESHSGEQFDKPVLAEDKGKKGIWENKFAHDPGNPPRSLSGNYFSAIRFLCCGPEIEYEKEVRQEMRWIKAKHNRESRELGDKRFGIATESSHTSNREHKTEQCIMPPLPQTANGVHNGIHLKPLGNIWNYESSCRSQVQKNHPNLDTQRAQNCEVMCSHKEGMVTEKSFYTGSLRDTLHRTVSLPVDAVDV 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02254 734 CDD STKc_WNK 22 281 - -
Gma03g02254 734 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Gma03g02254 734 Gene3D - 370 436 - -
Gma03g02254 734 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02254 734 MobiDBLite consensus disorder prediction 534 555 - -
Gma03g02254 734 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 373 427 IPR024678 GO:0004674|GO:0005524
Gma03g02254 734 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 721 - -
Gma03g02254 734 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Gma03g02254 734 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Gma03g02254 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gma03g02254 734 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02254 734 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02254 734 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02254 Gma-Chr3 47854166 47857218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02254 1 499 MAP Kinase Kinase Kinase AT3G22420 57.699 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma03g02254 Pkinase 5.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02254 K08867 - gmx:100790554 1530.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02254 03 47854166 47857218 Gma03g02254 03 47854166 47857218 ECH
Gma19g02289 19 51621223 51624484 Gma03g02254 03 47854166 47857218 GST
Gma03g02254 03 47854166 47857218 Gma10g01580 10 42872932 42876461 PCT
Gma03g02254 03 47854166 47857218 Gma20g02129 20 48556305 48559683 PCT
Gma10g01580 10 42872932 42876461 Gma03g02254 03 47854166 47857218 PCT
Gma20g02129 20 48556305 48559683 Gma03g02254 03 47854166 47857218 PCT