Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02251 ATGGCTTCGGAGCAACACGACGCCGTTTTCCGCGAAGAAGACATGGACGACGACGACGACGAGTCTCAGGAGGACGAAGAGTACGAAGAAGACGACGACGAAGAAAACGTGCCCTCTCCCTCCACCGCTCTCGCTGTCACCGTCGCCGTCCCCGGTTCCGCCGTCTCCAACGGCGGCGGTGGCTCTCCAATTTCGAAGCCCACCGCCACCGCCACCACCGCCACCATCGTCCTCGCCGACTCATCCGATCCGAAGCGGCGTCGCCTGGAGCTAATCGAGGAGAAAAAGCCGCCGCCGCCGCTGGATGACTCGCGGCGGCTGTTTCAGCGGCTGTGGACCGATGAGGATGAGATCGAGCTCTTGCAAGGGTTCCTCGACTACACATCGCAGCGAGGATCCTCGCACCACAACGACACCGCTTTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGATTTCAACAAGAATCAGCTCGTGGAGAAGATCCGAAGGCTGAAGAAGAAGTACCGGAACGTCCTCAACAAGATTTGCTCCGGCAAGGAATTCTCCTTCAAGAGCGCTCACGATCAAGCCACCTTCGAAATCTCGCGCAAGATCTGGAGCAACGTGACTCCAGTCGGCGACAATTCATTGGACGACGACGAAATCAACCCTAGCCGTAGCCCCAACCCTAACCTTAATTTTAGCCCTGTAATTCTTAAGAATGAAACGATTTTCAGGAATTCCACGGAGAAGAAAACACCGAAACGCTCTCGGCCTCGATCGGCGGTGAAAATCGAGCCAAATGACGGATCCGCGTCGAACAGAGATCATAATtgtattagcaatactacacctactgctactgctgctgctactaacactactgctgctgctgctggtactaacaataataactgTAACAGTGGTTATGGAAATAACATACCGAGTTTGATTGAGGAGACGGTGAAGAGTTGTTTGTCGCCGGTGTTGAAGGAATTGATGGCAGGGGCCATGGGAGGAGGAGCGTTTGGAGGGAGAGGGTTTTCGTTGAACTTGAACCCTATGCCTTTTATGAATTTGAGTTTTGGCGGTGGGGAAATGGTGGATGAGAAATGGAGGAAGCAACAGATATTGGAGTTGGAAGTGTATTCGAAGCGGTTGGAACTGGTGCAGGATCAGATCAAGGCAGCTATGGAGGAGTTGCGGTCACATGGAGGAGGAGGATTATAG 1215 0.4996 MASEQHDAVFREEDMDDDDDESQEDEEYEEDDDEENVPSPSTALAVTVAVPGSAVSNGGGGSPISKPTATATTATIVLADSSDPKRRRLELIEEKKPPPPLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKICSGKEFSFKSAHDQATFEISRKIWSNVTPVGDNSLDDDEINPSRSPNPNLNFSPVILKNETIFRNSTEKKTPKRSRPRSAVKIEPNDGSASNRDHNCISNTTPTATAAATNTTAAAAGTNNNNCNSGYGNNIPSLIEETVKSCLSPVLKELMAGAMGGGAFGGRGFSLNLNPMPFMNLSFGGGEMVDEKWRKQQILELEVYSKRLELVQDQIKAAMEELRSHGGGGL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02251 404 Coils Coil 375 395 - -
Gma03g02251 404 MobiDBLite consensus disorder prediction 240 258 - -
Gma03g02251 404 Coils Coil 156 176 - -
Gma03g02251 404 MobiDBLite consensus disorder prediction 1 68 - -
Gma03g02251 404 PANTHER BNAANNG10740D PROTEIN 1 400 - -
Gma03g02251 404 PANTHER BNAANNG10740D PROTEIN-RELATED 1 400 IPR007592 GO:0006355
Gma03g02251 404 MobiDBLite consensus disorder prediction 11 37 - -
Gma03g02251 404 MobiDBLite consensus disorder prediction 240 273 - -
Gma03g02251 404 Pfam Protein of unknown function, DUF573 108 202 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02251 Gma-Chr3 47837212 47838971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02251 1 403 GeBP Transcription Factor Family AT5G28040 42.889 2.30e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gma03g02251 DUF573 3.4e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02251 - - gmx:100790030 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02286 19 51597137 51600875 Gma03g02251 03 47837212 47838971 GST
Gma03g02251 03 47837212 47838971 Gma10g01577 10 42856280 42858050 PCT
Gma03g02251 03 47837212 47838971 Gma20g02133 20 48574445 48575518 PCT
Gma10g01577 10 42856280 42858050 Gma03g02251 03 47837212 47838971 PCT
Gma20g02133 20 48574445 48575518 Gma03g02251 03 47837212 47838971 PCT