Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02204 ATGGCTTCCATCCTCCACTACTTTTTAGCCCTCTCTCTTTCTTGCTCTTTTCTTTTCTTCTTATCCGACTCAGTCACCCCTACAAAACCAATAAACCTTGTTGTTCTACCCGTTCAAAATGATGGTTCCACAGGGCTCCATTGGGCCAACCTCCAAAAAAGAACCCCTCTAATGCAAGTACCAGTCCTGGTGGACCTCAATGGAAATCACTTGTGGGTTAACTGTGAGCAGCAGTACTCATCCAAAACGTACCAAGCACCCTTCTGCCACTCCACCCAATGCTCTAGAGCCAACACCCACCAATGCCTCAGTTGCCCCGCGGCATCAAGGCCAGGGTGCCACAAAAACACGTGTGGCCTCATGTCCACTAATCCCATCACCCAACAAACCGGTTTGGGTGAACTAGGAGAAGACGTTCTTGCAATCCACGCCACACAAGGGTCGACCCAACAACTTGGCCCATTGGTCACAGTCCCACAATTCCTCTTTTCTTGTGCACCTTCCTTCCTTGTTCAAAAGGGTCTTCCTAGAAACACTCAAGGTGTGGCTGGGTTAGGCCATGCACCAATTTCTCTTCCAAACCAACTCGCTTCCCACTTTGGCCTACAACGCCAATTCACCACTTGCCTTTCTCGCTACCCTACTTCAAAGGGTGCTATAATATTCGGGGATGCACCTAACAACATGCGACAGTTTCAAAACCAAGATATTTTCCACGATTTGGCCTTCACCCCATTAACCATCACCCTGCAGGGAGAGTACAACGTGAGAGTCAACTCAATAAGAATCAACCAGCACAGTGTGTTCCCACTGAACAAGATATCATCCACCATCGTAGGGTCGACCTCTGGAGGAACCATGATTAGCACCTCAACTCCTCACATGGTTCTCCAGCAATCCGTGTACCAGGCTTTCACTCAGGTGTTTGCTCAGCAGCTGCCAAAGCAAGCACAGGTGAAATCTGTGGCACCATTTGGGTTATGCTTCAACTCCAACAAGATCAATGCATATCCTAGCGTGGACCTTGTGATGGACAAGCCCAATGGTCCTGTTTGGAGAATCTCTGGTGAGGACTTGATGGTGCAGGCACAACCTGGGGTCACGTGTTTGGGTGTTATGAATGGAGGAATGCAACCTAGAGCTGAAATTACCTTAGGGGCACGTCAGTTGGAAGAGAACCTGGTGGTGTTCGATCTTGCAAGGTCAAGGGTCGGGTTTAGCACCTCATCACTGCACTCGCATGGAGTCAAATGTGCTGACCTCTTCAACTTTGCCAATGCATGA 1284 0.4914 MASILHYFLALSLSCSFLFFLSDSVTPTKPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADLFNFANA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02204 427 SUPERFAMILY Acid proteases 38 411 IPR021109 -
Gma03g02204 427 CDD xylanase_inhibitor_I_like 52 409 IPR033868 -
Gma03g02204 427 Pfam Xylanase inhibitor N-terminal 50 224 IPR032861 -
Gma03g02204 427 Gene3D Acid Proteases 225 427 IPR021109 -
Gma03g02204 427 PANTHER BASIC 7S GLOBULIN 6 424 - -
Gma03g02204 427 PANTHER ASPARTYL PROTEASE-RELATED 6 424 IPR001461 GO:0004190|GO:0006508
Gma03g02204 427 Gene3D Acid Proteases 25 224 IPR021109 -
Gma03g02204 427 Pfam Xylanase inhibitor C-terminal 253 407 IPR032799 -
Gma03g02204 427 ProSiteProfiles Peptidase family A1 domain profile. 47 407 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02204 Gma-Chr3 47406045 47407449 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02204 - - gmx:547908 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02240 19 51117433 51118734 Gma03g02204 03 47406045 47407449 ECH
Gma02g01352 02 15662828 15664507 Gma03g02204 03 47406045 47407449 ECH
Gma10g00245 10 2253824 2254955 Gma03g02204 03 47406045 47407449 ECH
Gma03g01400 03 40131170 40142054 Gma03g02204 03 47406045 47407449 ECH
Gma03g02204 03 47406045 47407449 Gma03g02204 03 47406045 47407449 ECH
Gma19g02240 19 51117433 51118734 Gma03g02204 03 47406045 47407449 GST