Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02202 ATGGCAGTGGCATCCTCCTTCATCATCATCATCATCGTCATCATCGCTCTCATCTTCTTCTCCCTAAACCCTCCTCCTTCACCATCACGTAGGTCACTTCTCCTCACCACTTCATCGTCTTGCTCCAACGAATCCAATGGCCTTCTCAACTACCACTGCATCTTCCCCCAAACTTCCTCTTTCTCAATCCCCTCCCTCTCGCTCTTCCTCCTCCTCCACTTCTACATCCTCATCACCACCGCGCAGCACCACTTCTCCCTCGTCACCACAAAGCTCGCCTCGCACCTCAACCTCTCCCCCAGCATGGCCGCCGTCACGCTCCTCTCCCTCGGCAACGGCGCCCCCGACGTCTTTTCTTCCCTCGCCGCCCTCCGCGCCGGTCAGTACCGCACCGGCTTcggcgccattctctccgccggcgccttcgtctccgccCTCGTCGTCGGCTTCGTCGCCATCTACGCTGCTCCGTTTTCCGTCGATCCCGCGCCCTTCGTTAGAGACGTGCTCTTCTACTTGACCGCCGCAATGTTCCTCTTCTATGTGTACCTCAGCGCCGAGATTTTCCTCTGGCAGGCCGTCGGATTCGTTGGATTTTACTTGTTCTTCGTCGGATTTGTGTTTTACATGGATTTGGGGATGGCGGATCGCAGAGAGAAGAGTTCCGAGGATCTCGAGGGACAGAAGGAACCTGATTCCGACGATGTCAAGGTTTCCGAATCTTCCGTGGGAGAGAAACGCGCTTCTTCTGGATTGCGTGGAGCTATTCGATTGATTTCTAAAACATGGGAGCTTCCTGTCAAAACTCTCCTGAGATTGACAATCCCTCAACCAGCACCTTCACAATGGAGTAGATTTTATGCATCGGCCAATATTGCACTCTGTCCGCTAGCCCTCTTGTATGCCTGCAACTCATTCATGCCATTTAATCATCCCATAGTTTTCCTCCTCCCCAACTCTCACGTCCCCCTCTGGTCAGTAGTGCTCATGACAAGTTTCTCTCTTGCACTTTTTCACTATGTAATGGAAAAAGAACCCCCCAAGACAGAGCATATGCCTGTGGTCATCGTGGCATTTGTGATGAGTGTGTTTTGGATATCTACTACAGCCGGAGAGCTGGTGAACTGCCTAGAAGCTATAGGTGTGCTTCTTGAACTGCCGCCAGCACTCCTGGGTCTCACAGTGCTGGCGTGGGGAAATTCAGTGGGAGATCTTGTTGCAGATGTTGCAGTTGCTAAAGCCGGTCATCCAGCTATGGCAATGGCGGGATGCTTTGCAGGACCAATGTTTAACATGCTTGTTGGCCTTGGAACTGCTTTGGTCATACAGACGGCCAATATATATCCTAGAGCATATCAGCTTAATTTCCACGTTGGTATCGTGATTGCATTTGTATTCCTTCTTTTAAGCCTTATGGGGTCTCTCTTGGTGATCACTTGGTGCAGATTCAGAGTGCCTAGGTTTTGGGGCTTCTGTCTGGTAGGCATCTATGTtgcttttacggcagtgagtttagtaatagccatgttttcagggtga 1539 0.486 MAVASSFIIIIIVIIALIFFSLNPPPSPSRRSLLLTTSSSCSNESNGLLNYHCIFPQTSSFSIPSLSLFLLLHFYILITTAQHHFSLVTTKLASHLNLSPSMAAVTLLSLGNGAPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFSVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVGFYLFFVGFVFYMDLGMADRREKSSEDLEGQKEPDSDDVKVSESSVGEKRASSGLRGAIRLISKTWELPVKTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFMPFNHPIVFLLPNSHVPLWSVVLMTSFSLALFHYVMEKEPPKTEHMPVVIVAFVMSVFWISTTAGELVNCLEAIGVLLELPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTANIYPRAYQLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGIYVAFTAVSLVIAMFSG 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02202 512 Gene3D - 288 506 IPR044880 -
Gma03g02202 512 Gene3D - 98 229 IPR044880 -
Gma03g02202 512 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 37 234 - -
Gma03g02202 512 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 259 511 - -
Gma03g02202 512 MobiDBLite consensus disorder prediction 221 245 - -
Gma03g02202 512 MobiDBLite consensus disorder prediction 221 242 - -
Gma03g02202 512 Pfam Sodium/calcium exchanger protein 67 208 IPR004837 GO:0016021|GO:0055085
Gma03g02202 512 Pfam Sodium/calcium exchanger protein 355 505 IPR004837 GO:0016021|GO:0055085
Gma03g02202 512 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 259 511 - -
Gma03g02202 512 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 37 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02202 Gma-Chr3 47397219 47400292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02202 29 511 Antiporters AT1G08960 69.556 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02202 K13754 - gmx:100775437 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02202 03 47397219 47400292 Gma03g02202 03 47397219 47400292 ECH