Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02174 ATGGGTCTTGATTCTCAGGCTCACAGCATGGTTTTTATCATTACCATATTGATATTCTTGTCATTGCAAAATGCAGCAGGAAATGAAAATCAGATTGAGACAATCTCAGGAATGGATGAGAATGAAAACAAGCAAACTCCTATAGTGGAAAACTTTAGAACTTTGCTTGGACTCAACATGTTCAACACAAGAAAGCCATGCTATAATGTTGCTGACTCTAACTTTGTGTCCCTCTCACCTTCTCTGTCACCCAACACCGAAGCTGAGGCTCTGGCTCCGGCTCCGGCTTCGGAGCTGCACGTGCACCCTCATTCCTATCACTCACATAGGAACTTGCCACTTCACAAGATTCTAAAAGAAGATAAAGGCATGGCAAAAAGAACAACAATAGTAGCTGTTGTAGTACCTGGTGGAGTTGCTACCTTAATTTGTGCACTTGGGTGTGTCTGTGTTTGCAAGAAATTCAGAAATCACAAAAGGAAACCCAATAGGACAATGCCACTCTTCAGCAAGAACGAAAGAACAGGATGTACGTCTACGTACCAAAATTCATCAAGCAATGTGAGTTTAAACTCTGCCCCTGATCTGTTTTACCTCACTTGTTTGAAACAAACTTGTGACACACAAAATAGAAGTACTTCAACCCATGATTCCCCCAAACGTACAATTTATGAGAAGAAAGTGTTGCGTAAAGAAGAATATGACAAGGCTAGCACTAGTAGCTCTTCCACAAAGGAAATTCTCTCTGTTCATGAGGATTTGGAATATCAATGTGGCAAAGCTTCATCTGGAGAAAAAACTGTCCTTCGAGGATGCCATAGCCTTCCATCAGACAACGAAAGTTTTCATTCATGTTTTGATACTCACTCATCAGTAAGTGAAACAGAAACATTGTGTCTCTCTCCTAGAAATTCAATCTCTTCAACAAATCAATTTCCTTGCCCCCCTCAGAATTCAACTACAAAGGTAAAACTAAAACCTAACCAATCGCAATCACCATGCATTCCGCAACAAGATGAACAAAAGAAGATTCAAACTTGTCAACCTAGCATTCCTCCCCCACCATGTCCACCTCCATTTTTGAAAGGAAACATTAACAGTGCAATCAAAACTCCACCTTCTCTACTTCCTCAAGGTAAGGGTGGAAGTTCTCCACTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCCACGCCAGATCGAACAATGGTGTGGGATAAGCTACGAACAAGCTCATTTGAGTTGGACGAGGTAATGATCGAGTCACTCTTTGGCTACAATTTACAAAACTCAGTGAAGAACGACGAAACAAAGAGCAAAACCCCGTCTCCTAGCAAGCATGTACTTGAGCCAAAACGGTTTCAAAACATAGCAATTCTCTCCAAAGCTCTAAATACCACAGCTGAACAAATATGCGAAGCCCTGATACTAGGGAAAGGCTTGTCTTTGGAACAACTAGAGGCACTGGTGAAAATGGTACCCACGAAGGAAGAAGAGGCTAAGCTCTTAAGCTACAAAGGAGACGTCAATGAACTAGGGTCTGCTGAAAAGTTTGTGAGAGCAATGCTTAGCGTACCATTTGCCTTTCAACGAGTGGAAACCATGCTTTACAGAGAGACTTTCGAAGATGAACTATTTCACCTCAGTAACTCTTTTTCAACGCTAGAGGAAGCGTGCAAGGAACTAAGGTCAAACAGGTTCTTCTTGAAATTGCTGGAAGCAGTGCTGAAAACAGGAAACCGCATGAACGTTGGGACAATCAGGGGAGGTGCCAGAGCCTTCAAACTCAACGCCCTTCTGAAGCTTGCTGATGTTAAAGGAACAGATGGTAAAACAACCTTGCTCCATTTCTTTGTTAAGGAGATTGTTCGCTCGGAAGGAATCAAGGCTTCAGAGAGGATCATGGGGCAGAAAAGCGAAAACAGAACGGAGGAAGAGAAGGAAGAAAATTATAAAAGAATAGGACTAGAACTTGTTTCTGATCTAAGTGCTGAGTTATGCAATGTTAAGAAGACAGCCACAATTGACTTGGATGTTCTTGCAAGCTCTATCTCAAACCTATCAAGTGGAGTGGCTAACATGCAGAACCTGGTAAAGGGTCTTTTGTGTGAGGATGAAAAGAGTGAGAGCTTTGTCATTTCTATGAAGTGGTTTCTGAACTATGCAGAGAGAAAGGTACAGGACCTGCAAGGATGTGAAGGGAGAGTCATGGCTCGTGTCAAAGAAATAACAGAGTATTTTCATGGGGATGAGAGTAAAGAAGAGTCGAATCCACTTCGAATCTTTGTGATCGTGAGGGACTTTCTGGAGATGGTAGATAATGTTTGCAATGAGCTTAAAAGGTCGTCTACGAAATCACCTCGCACCATTCGGTTACAGTAG 2388 0.4221 MGLDSQAHSMVFIITILIFLSLQNAAGNENQIETISGMDENENKQTPIVENFRTLLGLNMFNTRKPCYNVADSNFVSLSPSLSPNTEAEALAPAPASELHVHPHSYHSHRNLPLHKILKEDKGMAKRTTIVAVVVPGGVATLICALGCVCVCKKFRNHKRKPNRTMPLFSKNERTGCTSTYQNSSSNVSLNSAPDLFYLTCLKQTCDTQNRSTSTHDSPKRTIYEKKVLRKEEYDKASTSSSSTKEILSVHEDLEYQCGKASSGEKTVLRGCHSLPSDNESFHSCFDTHSSVSETETLCLSPRNSISSTNQFPCPPQNSTTKVKLKPNQSQSPCIPQQDEQKKIQTCQPSIPPPPCPPPFLKGNINSAIKTPPSLLPQGKGGSSPLPKLKPLHWDKVRATPDRTMVWDKLRTSSFELDEVMIESLFGYNLQNSVKNDETKSKTPSPSKHVLEPKRFQNIAILSKALNTTAEQICEALILGKGLSLEQLEALVKMVPTKEEEAKLLSYKGDVNELGSAEKFVRAMLSVPFAFQRVETMLYRETFEDELFHLSNSFSTLEEACKELRSNRFFLKLLEAVLKTGNRMNVGTIRGGARAFKLNALLKLADVKGTDGKTTLLHFFVKEIVRSEGIKASERIMGQKSENRTEEEKEENYKRIGLELVSDLSAELCNVKKTATIDLDVLASSISNLSSGVANMQNLVKGLLCEDEKSESFVISMKWFLNYAERKVQDLQGCEGRVMARVKEITEYFHGDESKEESNPLRIFVIVRDFLEMVDNVCNELKRSSTKSPRTIRLQ 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02174 795 Pfam Formin Homology 2 Domain 385 775 IPR015425 -
Gma03g02174 795 Gene3D Formin, FH2 domain 402 793 IPR042201 -
Gma03g02174 795 MobiDBLite consensus disorder prediction 309 335 - -
Gma03g02174 795 PANTHER FORMIN-LIKE PROTEIN 27 783 - -
Gma03g02174 795 PANTHER FORMIN-RELATED 27 783 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma03g02174 795 SMART it6_source 379 789 IPR015425 -
Gma03g02174 795 SUPERFAMILY Formin homology 2 domain (FH2 domain) 352 783 - -
Gma03g02174 795 ProSiteProfiles Formin homology-2 (FH2) domain profile. 379 795 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02174 Gma-Chr3 47190893 47193935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02174 370 782 FH2 protein (formin) Gene Family AT3G05470 69.249 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02174 - - gmx:100776340 1531.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02174 03 47190893 47193935 Gma03g02174 03 47190893 47193935 ECH
Gma19g02215 19 50938669 50942554 Gma03g02174 03 47190893 47193935 GST
Gma03g02174 03 47190893 47193935 Gma10g01500 10 42113646 42118568 PCT
Gma03g02174 03 47190893 47193935 Gma20g02206 20 49158333 49161751 PCT