Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02153 ATGGGGCATTTTTCCTCAATGTTCAATGGGTTGGCACGGTCTTTTTCAATGAAGAAAGGAAGAAGGAATGGGAAATGTGGGGGGAGGGAAGCTGCTGAAGCAATGGCAAAGGAAGCTAAGAAGAATGACATGATGTTGTGTAGCTCTGGCATTGTTCATGTCGATGGTTCAAACAACTTTGCCTCCGTTTTCTCCAAAAGAGGCCAGAAAGGAGTGAACCAAGATTGCTGCATGGTGTGGGAGGAATTTGGATGCCAAGAGGACATGATATTTTGTGGGATATTTGATGGGCATGGACCATGGGGTCACTTTGTGGCCAAAAGAATAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACATTAGCCCAAACTTCAATTGATCATCCGGCTATTGATGTAGAGGAAGAGAAAAGTAAACATTACAGATTCAACATATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTAGAGCAATATCGCAAGATAGACTCGTTTTACAGCGGAACAACTGCCCTATCAATTGTTAGACAGggtgaactcattgtcatagcaaatgttggcgactctcgtgctgtattggctacaacatcagatgatggaagtctggtaccagttcaactaacaatcgatttcaagccaaatttaccacaggaggcagagagaataattcagtgccaggggcgtgtgttctgcttagaggacgagccaggggtgcatagggtgtggttaccggatgaagagtctccgggactagccatgtctagggcctttggtgactactgcatcaaagggcatggtcttatttctgtgcctgaggtaacacacagaaatataactagtagagaccagtttgttgtgctagccactgatgggGTTTGGGATGTAATCTCTAATAAAGAAGCAGTGGATATTGTATCTTCAGCAGCAGATAAAGCTAAGGCAGCTAAACGTTTGGTGGAGTGTGCGGTGCATGCATGGAAACGCAAGAGACGGGGCATTGCCGTGGATGACATTTCAGCTATTTGTCTCTTCTTTCACTCTTCTTCCCTTTCAACAGGGCAAGTTAGCCAGGTTGCCACATTAAAATAG 1116 0.3029 MGHFSSMFNGLARSFSMKKGRRNGKCGGREAAEAMAKEAKKNDMMLCSSGIVHVDGSNNFASVFSKRGQKGVNQDCCMVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRIRESMPPSLLCNWQETLAQTSIDHPAIDVEEEKSKHYRFNIWKHSYLKTCAAIDQELEQYRKIDSFYSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQEAERIIQCQGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDYCIKGHGLISVPEVTHRNITSRDQFVVLATDGVWDVISNKEAVDIVSSAADKAKAAKRLVECAVHAWKRKRRGIAVDDISAICLFFHSSSLSTGQVSQVATLK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02153 371 SMART PP2C_4 51 352 IPR001932 -
Gma03g02153 371 PANTHER ALPHABET, ISOFORM E-RELATED 1 361 - -
Gma03g02153 371 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 361 - -
Gma03g02153 371 Pfam Protein phosphatase 2C 85 332 IPR001932 -
Gma03g02153 371 CDD PP2Cc 59 354 IPR001932 -
Gma03g02153 371 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Gma03g02153 371 SUPERFAMILY PP2C-like 56 355 IPR036457 -
Gma03g02153 371 Gene3D - 52 357 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02153 Gma-Chr3 46987672 46991487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02153 1 355 PP2C-type Phosphatase Gene Family AT3G05640 72.269 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02153 - - gmx:100801309 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02188 19 50698028 50699904 Gma03g02153 03 46987672 46991487 GST
Gma03g02153 03 46987672 46991487 Gma10g01483 10 41942456 41944429 PCT
Gma03g02153 03 46987672 46991487 Gma20g02218 20 49317688 49321397 PCT
Gma10g01483 10 41942456 41944429 Gma03g02153 03 46987672 46991487 PCT
Gma20g02218 20 49317688 49321397 Gma03g02153 03 46987672 46991487 PCT