Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02142 ATGGAGACGGAGAAAAAACGTTCCAAGGGAAGCTTCCTTAGCTTCTTTGATTGGAACACCAAATCTCGAAAGAAGTTGGTTTGGAACGATCCTGAGGTTTCAAAGCAAGGGAAGGAAAATGTGGAGAACTTACCGAAGTCACGGCTCACTAGGAAAAAGGTGGATGAAATTGGAGCAAGTCCAAGTAACATTCAAAGTTGTGATTTTGACAGTACCCTCTCAATTTGTAGTGATGAAGGATGTGGGAGTAAAGCCCCTGGGTTAGTAGCGAGACTCATGGGTCTGGATTCATTGCCAGCTGCAGCAGCCACTGAGCTCTCCTGTACTTCATTGTATGGCTCTAAATCTCATGGAGCTTCACATTGTAATGAGGGTGCTCTTCACTCAGTGGATGACTTTTTCCCTGCAGACTACATAAACACACTGCTTAAGCCAGAGAAGTCTTCTTTGGAAGCCATGGAATCAAGGGCACGAAAAGTGGAAAACCTTCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCACAATAAACTGTTGTCTCCTATCAAGAGTCCTAGTATTCTGCCACCAAAGAATGCAGCTCATGTAATGGAGGCAGCTGCTAAGATAATTGAGGCAAGCCCTCGGCCATATTTTAGGAATAGAACAGCATTAACCGAGCCTTCATCTGTTCCCTTGAGAATTCTCAATTTGAAAGAGAGATTTGAAGCTGCACAATATATATCCATGCCTGGAAAGCTCGAGAATCTGAGCAATTCCTATCCTGCAAATGGCAAGCTTAGTGAGAGGAGCAGTAATTTGTATAAATGCACTTCAGCATTCAAGGGTTCAAGAGTTTTAGAAAAAAATAGTTCTTGCCATTCAGCCAGTAAAGGAAAATCAGTTTCACTTACAATACAAGCCAAAAACAATGCTCATAGTAGAGATACATTGATTTCAAATGGTGATAGGAAATGCATGAAACAGAGAGAGAAGAATGACATAAAGTCAAATCAACTCTCAAGGAGCCAGAAACCAAGTAAACAAAAAGCTATGCAGCAGAGACCTTGCTCAAGCCGGAATAGCAATGTGCTTGGGCAGAATAATCAAAAGCAAAATAGCATGGCTGCCAAGGGTAAATTAACTTCAACAATAGATTCCAATAAGCCAACAACACGAGCTTCATCTCCAGAAACTTCTGGAATAAGGAAGACAATGAACAAGGGTGCTAAAACTGCAAATATTCAACCTAAAAGGTCAAGCAGTAGGGCAACTGACAACCAAAAGCAGTTTCCAAGATCCAAAGCAGTGAGTATTTCCCAGAAGAAAAAGATTAGCAGAGATGTTCATGAGGCAAGAGGTCCTGATGAAGTAAATAATTTTGGAAGTAAGTCCATTAAATGCAATTTTACGACTGATGGAAGTTTTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTGAGGAGAAGTATGCCtgagtcatcatcctctactgagcaagtgatgggaACCAGAAATAGAATTGATGTCAACTCTATTGGGCATAGTGATAATCTTTATCCCAAAAAATTATCATTATCTCCGCCAGGGCAACCTATGATAGATAGTGATGCTTTAAGTGTCCTGTTGGACAAAAAGCTGCAAGAATTGACATCTAGAATTAACTTACCTCAATGTACCTTGGCCACAGAAGGGTCTTCTACTGGTTTGAGATCTAGTGTGCAAGATCAAGTTCCCAGTGTGTCAAGCAACACGCCTAAGGAACAAGACAAAAGCTTTTGCAGTGACCTGTCTAGTGATAAACTGGATAGCATGCATAACTCTCATTATTGTTCAAGTGATGACCCAGTGCTTAACATGAATCGGCAACTGCTGACATCAGAAGTAAGTGAAGATCCTAGCTGTAGCAGCAACAGTGAAAGTGGAAATGATCTAGTTTGTTGGCATTCCACTGCTGTTGCAGGTTTTGAAACTCCTTTTGTCAGCGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGCAGCACAGTTTATTCTTCCACACAAGATGAAGAAGTATCTAGTTTTACCCAGATAAGTGAATCTGTATCACTTGAAAGTGAGGTGAAAGGGTCAGAGCAAAGCTCTTCACCATTGGGGGGTGGAAATATGGCCATCAAACAAATAAGTAGAACATCAAATTCGGTTGATTTTAAAAGATCAAGGAACACAGTACTTGAATATGTACATGATATTCTTTGCAATGCAGAGTTTACGGCAGAAGAATTTGTCACGGGTCAAACTAGTACACTCATAATGCCCAATGTCTTTGATCTGTTGGAGAATCAGATTTATGGAACAGAAAACTTCGGAGAAGATTACTCTAAGCTTGAAAGGAAGGCTATATTTGACTGTGCGAGTGAGTTCCTAGAGTTGAGATGTAAGCAAGCTTTTGTTGGAACGTGCAAAGCATGGCCTGGATGGGTGATGTCAGTTCAGAGGAAGAGCTGGATGGCAGAGGAACTGTACAAGGAGTTGCTGGGTATTAGAAGCATGGAAGAGACAATGGTGGATGAGCTTGTCACCAAGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGGGACATTATGTCTTATTTGGTTAATGAATTGGTTTCTGATTTGTTACTTGTCTAA 2739 0.4023 METEKKRSKGSFLSFFDWNTKSRKKLVWNDPEVSKQGKENVENLPKSRLTRKKVDEIGASPSNIQSCDFDSTLSICSDEGCGSKAPGLVARLMGLDSLPAAAATELSCTSLYGSKSHGASHCNEGALHSVDDFFPADYINTLLKPEKSSLEAMESRARKVENLPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPSILPPKNAAHVMEAAAKIIEASPRPYFRNRTALTEPSSVPLRILNLKERFEAAQYISMPGKLENLSNSYPANGKLSERSSNLYKCTSAFKGSRVLEKNSSCHSASKGKSVSLTIQAKNNAHSRDTLISNGDRKCMKQREKNDIKSNQLSRSQKPSKQKAMQQRPCSSRNSNVLGQNNQKQNSMAAKGKLTSTIDSNKPTTRASSPETSGIRKTMNKGAKTANIQPKRSSSRATDNQKQFPRSKAVSISQKKKISRDVHEARGPDEVNNFGSKSIKCNFTTDGSFDQDAFNMKESKDVISFTFTSPLRRSMPESSSSTEQVMGTRNRIDVNSIGHSDNLYPKKLSLSPPGQPMIDSDALSVLLDKKLQELTSRINLPQCTLATEGSSTGLRSSVQDQVPSVSSNTPKEQDKSFCSDLSSDKLDSMHNSHYCSSDDPVLNMNRQLLTSEVSEDPSCSSNSESGNDLVCWHSTAVAGFETPFVSESYLDSEDSAYGSTVYSSTQDEEVSSFTQISESVSLESEVKGSEQSSSPLGGGNMAIKQISRTSNSVDFKRSRNTVLEYVHDILCNAEFTAEEFVTGQTSTLIMPNVFDLLENQIYGTENFGEDYSKLERKAIFDCASEFLELRCKQAFVGTCKAWPGWVMSVQRKSWMAEELYKELLGIRSMEETMVDELVTKDMSSGCGKWLDFDVEAFEEGLEVEGDIMSYLVNELVSDLLLV 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02142 912 MobiDBLite consensus disorder prediction 444 460 - -
Gma03g02142 912 MobiDBLite consensus disorder prediction 578 612 - -
Gma03g02142 912 MobiDBLite consensus disorder prediction 342 442 - -
Gma03g02142 912 Pfam Domain of unknown function (DUF4378) 753 904 IPR025486 -
Gma03g02142 912 MobiDBLite consensus disorder prediction 316 461 - -
Gma03g02142 912 MobiDBLite consensus disorder prediction 321 341 - -
Gma03g02142 912 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 912 - -
Gma03g02142 912 Pfam DUF761-associated sequence motif 77 101 IPR032795 -
Gma03g02142 912 PANTHER DUF4378 DOMAIN PROTEIN 1 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02142 Gma-Chr3 46891768 46895980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02142 3 910 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.147 3.48e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02142 - - gmx:102663635 1768.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02175 19 50587743 50596158 Gma03g02142 03 46891768 46895980 ECH
Gma03g02142 03 46891768 46895980 Gma03g02142 03 46891768 46895980 ECH
Gma03g02142 03 46891768 46895980 Gma10g01466 10 41751406 41755314 PCT
Gma03g02142 03 46891768 46895980 Gma20g02230 20 49421961 49425891 PCT
Gma10g01466 10 41751406 41755314 Gma03g02142 03 46891768 46895980 PCT
Gma20g02230 20 49421961 49425891 Gma03g02142 03 46891768 46895980 PCT