Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02133 ATGGTTAACCCAAGTACTATAACTCCCCCATCCTCCGAAGAACACACTTTTCATAATGCTATTGAATCTTCCTCTCACCAAATACCACCATCCTCAAACAAGAGTCGTGGTAGGCCCCTTGGATCCAAGAACAAGCCAAAAATACCCCTCGTTATTAACCAAGATAGCGATCTTGCCTTGAAACCCATCTTCATTCAAGTCCCGAAAAATTCTGATGTTATTGAGGCCGTGGTCCAATTTGCGCGCCAATGTCAAGTTAGCATCACAGTGCAAAGTGCATCTGGGTCTATCTTGGAAGCCACTCTCTGCCAAACTCTTCCTGACACTTCTACTTTCGTTGTTTTTGGACCCTTTACTTTGATTTCCCTCACCGGAACATACATTAATAATAACTGTTCTTTTAGGATTTCCTTTTGTTCAAATTTAGGTCAAAGCTTTACTGGAATTGTTGGAGGAAAGATTATTGCAGGCGATGATGTTAATGTGGTGGTTACTATTCTCAAAGAACTTTGA 513 0.4113 MVNPSTITPPSSEEHTFHNAIESSSHQIPPSSNKSRGRPLGSKNKPKIPLVINQDSDLALKPIFIQVPKNSDVIEAVVQFARQCQVSITVQSASGSILEATLCQTLPDTSTFVVFGPFTLISLTGTYINNNCSFRISFCSNLGQSFTGIVGGKIIAGDDVNVVVTILKEL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02133 170 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 169 IPR014476 GO:0003680
Gma03g02133 170 Pfam Plants and Prokaryotes Conserved (PCC) domain 61 167 IPR005175 -
Gma03g02133 170 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 169 - -
Gma03g02133 170 SUPERFAMILY AF0104/ALDC/Ptd012-like 60 167 - -
Gma03g02133 170 MobiDBLite consensus disorder prediction 1 48 - -
Gma03g02133 170 ProSiteProfiles PPC domain profile profile. 55 170 IPR005175 -
Gma03g02133 170 CDD DUF296 61 167 IPR005175 -
Gma03g02133 170 MobiDBLite consensus disorder prediction 1 39 - -
Gma03g02133 170 Gene3D - 60 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02133 Gma-Chr3 46847114 46847933 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02133 33 165 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.483 1.47e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02133 - - gmx:100795303 334.724