Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02128 ATGGAGTCTTTGTCTTTTTCTTTGCACTCAAACCTCCATTCCCTTACTTTGCTGCAACATTCCAATCAAAACAAGAAGCGCCGCAAAATCACACACCAAAACTCCTTAGCTCTCACTCCCTGGACTTCCCATACCCAACACCGCCTCTACTCTTCCAACCTCCTCCTCGCGCTCCGCCGCAACAGCAACCCTACCGCCTCCCTCCAAGTCCGCGCCGCCGCAGACCGCGTCCTCGCCGCCACTGCCAAAGGCCGAACTCGCTGGAGCCGCGCCATTCTCGCAAATCCGTTCGGCCGGTGGAGGAAGCAGAGGCAGAGGCACCACAAGAAGGTCAAGAACTGCTCCGCCAACAAATGTATGAAGAAGACCACGCCGGATATTCGGAGAAGGTTACCGGCGGTGCAGAAGAAGGCGCGCGTTCTCGGAAAGTTAATCCCTGGTTGCCGGAAGGTGTCGTTCCCGAAGCTTCTAGAAGAAGCCGGTGACTATATTTCAGCGTTGGAGATGCAAGTGCGAGCCATGAAGGCTCTCGCAGACCTTCTCCCCACCGGTGCTCCGCCGCCAGATCCGATCGGTTTAAGTTGA 585 0.5641 MESLSFSLHSNLHSLTLLQHSNQNKKRRKITHQNSLALTPWTSHTQHRLYSSNLLLALRRNSNPTASLQVRAAADRVLAATAKGRTRWSRAILANPFGRWRKQRQRHHKKVKNCSANKCMKKTTPDIRRRLPAVQKKARVLGKLIPGCRKVSFPKLLEEAGDYISALEMQVRAMKALADLLPTGAPPPDPIGLS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02128 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 186 IPR036638 GO:0046983
Gma03g02128 194 PANTHER TRANSCRIPTION FACTOR BHLH150 8 192 - -
Gma03g02128 194 CDD bHLH_AtIBH1_like 128 178 IPR044549 GO:0006355
Gma03g02128 194 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 192 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02128 Gma-Chr3 46783545 46784333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02128 34 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.161 1.25e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02128 - - gmx:100813766 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02163 19 50482833 50483781 Gma03g02128 03 46783545 46784333 ECH
Gma03g02128 03 46783545 46784333 Gma03g02128 03 46783545 46784333 ECH
Gma19g02163 19 50482833 50483781 Gma03g02128 03 46783545 46784333 GST
Gma03g02128 03 46783545 46784333 Gma10g01445 10 41527717 41529423 PCT
Gma03g02128 03 46783545 46784333 Gma20g00939 20 35969565 35970594 PCT
Gma10g01445 10 41527717 41529423 Gma03g02128 03 46783545 46784333 PCT
Gma20g00939 20 35969565 35970594 Gma03g02128 03 46783545 46784333 PCT