Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02114 ATGGGGTCTGAAGGTCCTACGACACCGACAACAACAATTCATGTGACAGGATTTAAGAAATTCCATGGAGTTTCAGAGAATCCAACAGAAACAATTGCCAATAATTTGACGGAGTACATGAATAAGAAGGGTTTGCCAAAGGGTTTAGTTATTGGGAGCTGCAGCATTCTTGAGACTGCTGGTCAAGGAGCACTTGTTCCACTGTACCAGAGATTACAATCCGCCGTTATTGCCAAGGACACTGAATCTTCAAATTCCAATAGAATTATTTGGctgcattttggggttaacagtggtgcaacaaggtttgctatagagaaccaagctgtcaatgaggctaatttccgatgccctgatGAAATGGGATGGAAGCCCCAGAAAGTCCCCATTGTTCCTTCGGATGGTGGAATTTCGCGAACAAGGGAGACTTCACTTCCTGTTGTGGAGATCACCAAAGCCTTGGCAGAGAAGGGATATGAAGTTATGGTATCAGTTGATGCAGGCAGGTTTGTGTGCAATTACGTTTACTATCATTCCCTTCGCTTCACCGAGCAAAACGGGATCAAATCCCTTTTCGTGCACGTGCCGCTCTTCGTGACAATAAATGAAGAGACTCAAATGCAATTCGCAGCTTCCTTGTTAGAGGTGCTTGCCTCTATACCTCAGTAG 669 0.3901 MGSEGPTTPTTTIHVTGFKKFHGVSENPTETIANNLTEYMNKKGLPKGLVIGSCSILETAGQGALVPLYQRLQSAVIAKDTESSNSNRIIWLHFGVNSGATRFAIENQAVNEANFRCPDEMGWKPQKVPIVPSDGGISRTRETSLPVVEITKALAEKGYEVMVSVDAGRFVCNYVYYHSLRFTEQNGIKSLFVHVPLFVTINEETQMQFAASLLEVLASIPQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02114 222 PIRSF Pyrrolidone-crbxlat_pptds 10 221 IPR000816 GO:0005829|GO:0006508|GO:0016920
Gma03g02114 222 Pfam Pyroglutamyl peptidase 13 198 IPR016125 -
Gma03g02114 222 CDD Peptidase_C15 13 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Gma03g02114 222 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 218 IPR036440 -
Gma03g02114 222 PANTHER BNAA09G15240D PROTEIN 1 220 - -
Gma03g02114 222 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 220 IPR016125 -
Gma03g02114 222 Gene3D - 9 220 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02114 Gma-Chr3 46687636 46690770 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02114 K01304 - gmx:100789152 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02114 03 46687636 46690770 Gma03g02114 03 46687636 46690770 ECH
Gma18g00412 18 3767331 3768794 Gma03g02114 03 46687636 46690770 GST
Gma03g02114 03 46687636 46690770 Gma10g01430 10 41361891 41367286 PCT
Gma03g02114 03 46687636 46690770 Gma20g00922 20 35761151 35764277 PCT
Gma10g01430 10 41361891 41367286 Gma03g02114 03 46687636 46690770 PCT
Gma20g00922 20 35761151 35764277 Gma03g02114 03 46687636 46690770 PCT