Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02113 ATGGCTTCAGTTGGTGTGGCACCAACATCATCAGGCTTGAGAGAATCCAGTGGTGTTGATAGATTGCCTGAGGAGATGAATGATATGAGAATTAGGGACGATAAAGAAATGGAAGCCACCGTTGTCGATGGTAACGGAACGGAGACCGGACATATCATTGTTACTACCATTGGGGGTAGAAATGGTCAACCGAAGCAGACTATAAGCTATATGGCAGAGAGGATTGTTGGGCATGGATCATTTGGGGTTGTCTTCCAAGCTAAATGCTTGGAGACTGGTGAAACTGTGGCTATCAAAAAAGTTCTTCAAGACAAGAGGTATAAAAACCGGGAGCTGCAAACAATGCGCCTTCTTGACCACCCAAATGTTGTCTGTTTGAAGCATTGTttcttttcaaccactgaaaaggatgaactataccttaatttggtacttgagtatgttcctgaaacagttaatcgtgtgatcaaacattacaacaagttgaaccaacggatgcctctgatatatgtaaaactctatacaTACCAGATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTCTGCCATCGGGATATCAAGCCTCAAAATCTATTGGTTAATCCGCACACTCACCAGGTTAAAATATGTGACTTTGGAAGTGCAAAAGTCTTGGTGAAAGGCGAACCAAATATATCGTACATATGTTCTAGATATTATAGAGCACCTGAGCTTATATTTGGAGCAACTGAATATACTACAGCTATTGACATTTGGTCAGTTGGCTGTGTATTGGCTGAGCTTATGCTTGGACAGCCCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGGTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAATCCTAACTACACGGAATTTAAATTCCCACAGATTAAAGCGCATCCATGGCACAAGATCTTTCACAAGCGCATGCCTCCAGAAGCTGTTGATCTGGTATCAAGACTACTACAATACTCCCCTAACTTGCGGTGCACTGCTTTAGATACCTTGACCCATCCTTTCTTTGATGAACTTCGTGACCCAAACACTCGCTTGCCAAATGGTCGTTTCCTTCCACCATTGTTCAATTTTAAATCTCATGAATTGAAGGGAGTCCCAGTTGAGATTTTGGTGAAATTGATTCCAGAACATGCGAGGAAGCAGTGCCCGTTTCTTGGCTTGTGA 1221 0.3857 MASVGVAPTSSGLRESSGVDRLPEEMNDMRIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVCLKHCFFSTTEKDELYLNLVLEYVPETVNRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELMLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDTLTHPFFDELRDPNTRLPNGRFLPPLFNFKSHELKGVPVEILVKLIPEHARKQCPFLGL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02113 406 CDD STKc_GSK3 65 357 IPR039192 -
Gma03g02113 406 MobiDBLite consensus disorder prediction 1 25 - -
Gma03g02113 406 Gene3D Transferase(Phosphotransferase) domain 1 150 398 - -
Gma03g02113 406 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02113 406 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 1 404 - -
Gma03g02113 406 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 404 - -
Gma03g02113 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Gma03g02113 406 Gene3D Phosphorylase Kinase; domain 1 54 149 - -
Gma03g02113 406 SUPERFAMILY Protein kinase-like (PK-like) 69 380 IPR011009 -
Gma03g02113 406 Pfam Protein kinase domain 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02113 406 MobiDBLite consensus disorder prediction 1 16 - -
Gma03g02113 406 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02113 406 ProSitePatterns Protein kinases ATP-binding region signature. 76 100 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02113 Gma-Chr3 46676681 46681757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02113 76 382 MAP Kinase Gene Family AT2G43790 35.110 3.88e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gma03g02113 Pkinase 8.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02113 K00924 - gmx:100788612 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02147 19 50357192 50360521 Gma03g02113 03 46676681 46681757 ECH
Gma03g02113 03 46676681 46681757 Gma03g02113 03 46676681 46681757 ECH