Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02106 ATGGACGGAGATGGAGCGACGACGATCGCGGAGGCGCAGTACGCGACGGCGAAGACATCGGTGTGGTGGGACATCGAGAACTGCCACGTCCCCAAGGGTTCGGATCCGCACGCCATCGCGCAGAACATCAGTTCTGCTCTCGTTCGCATGAACTACTGCGGCCCCGTCTCCATCTCCTCCTACGGCGACACCACGCGCATCCCAGCATCTGTACAGCACGCGCTCTCCAGTACCGGAATCTCCCTCAATCACGTCCCGGCCGGTGTGAAAGACGCAAGAGACGAGAAGATTCTTGTTGATATGCTGTTCTGGGCACTGGACAATCCCGCACCTGCTAATTATTTATTAATTTCGGGTGACCGAGACTTCTCGAATGCTCTCCATCAACTTCGGATGAGGAGATATAATATTCTTCTTGCGCAACCTCAGAAGGCATCTGCACCCCTAGTTGCAGCCGCCAAGAGTGTATGGCTTTGGACTAGCCTCTTAGCTGGAGGACCTCCTCTTTCTAATGGTGAATCACAACAACTTGGTAATGGTAGCCTCAGCCATGTATCATCTTCTGACTCCTTACAAATTCCGGTTACAAGTGCTACTCAGATACAACAACAGGTGGATTCCTACTCAGAAGTACATGTAGGAAATTCAAAATTTACAAATGGAGGAAGGGGATTTGATTCTAGATATCAGGGGAAAACAAATTGGAGAAACCTGAGCCAATCGAATGGACCTAGAGCCATGAATCCTCTGCCTGTTGTACTTCAAGATAATCGTAATCGTAATAATGCAAACTCTTCTCAACCTGGCAACTTTAATCTAAATGTTCCATCAAGTGCTACAAATCATGGTCATGGCAATACTGATCAGTTATGGAGCAATAACAGTAATCTACAGGGCAATCATCAAATCCCTTATTCACAGCCATTAAGACCAAACAACTTCCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATACACCAAATTCCCATACTTTTCCAACTTCAGTGGTTCCACCTAGGACTGGTGGTCCCAATTTCACTTCAGGACCACATACCAATGTGCCAGATATTGGTAGTCTGAGCATTTCTGGATATCCTAATAGTGTTCATAACCCACCTATTGTTCCGCAACGGAGTGGAGAGTTGAAACAGAATCCTAATAGTAATGCTCCACTTCTTTTAAGATCAATTGATGACAAAAATGGACATATGGTACAGAACAGTGGCACACAACAATTACACCAAGGTTATCAACATGGTCCAGAATATCAACCTATGCCGTTGGCAGCAATGGGTAATAATAACCCTTCTGGTAATGGTATGTGGGGTTCTCCGGGATGTCCTAAACCTTCTGAATATGTACAAGGCCTAATAGGGGTTGTTTTACTTGCCTTGAACTCACTAAAAAATGCAAAGATGATGCCAACTGAGGCAAATATAACTGACTGCATCCGGTATGGAGATCCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAAAGTGCTATAGAGCAGAATATGGTGGTGAAACAAAATTTAGGTGCTTTGCCGTTGTATGTTGGTAAGAATGATAAACTTTGGAAATGTGTAAATCCTTTAGGTGGTACTCCTAAGCAGCATTCAAAAGAAACATGGGATCAAATTGGAAAGTTTTTAACAACTCCTGCTGGAAGATCAGCACTAATGGGTACACAGTGCAAGTATGAAGCAGGTATTGTGATTAAGAGTATGTGCTTTAAAGATCTTGTTTTGGGTGATGTCCTTCAGATATTGAACATGTTAATTACCCATAAAAAATGGGTTACACATCATCCATCTGGTTGGCAGCCACTTAACATTACTCTTCCCGAGATAAACCCCACTTCAGGGGTTGTAGCTGgtgggcaaatttccccatctgggaaagagccttga 1920 0.4349 MDGDGATTIAEAQYATAKTSVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISSYGDTTRIPASVQHALSSTGISLNHVPAGVKDARDEKILVDMLFWALDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLSNGESQQLGNGSLSHVSSSDSLQIPVTSATQIQQQVDSYSEVHVGNSKFTNGGRGFDSRYQGKTNWRNLSQSNGPRAMNPLPVVLQDNRNRNNANSSQPGNFNLNVPSSATNHGHGNTDQLWSNNSNLQGNHQIPYSQPLRPNNFPLQPPFAPSNSYTPNSHTFPTSVVPPRTGGPNFTSGPHTNVPDIGSLSISGYPNSVHNPPIVPQRSGELKQNPNSNAPLLLRSIDDKNGHMVQNSGTQQLHQGYQHGPEYQPMPLAAMGNNNPSGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRYGDPKHRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGTPKQHSKETWDQIGKFLTTPAGRSALMGTQCKYEAGIVIKSMCFKDLVLGDVLQILNMLITHKKWVTHHPSGWQPLNITLPEINPTSGVVAGGQISPSGKEP 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02106 639 MobiDBLite consensus disorder prediction 254 310 - -
Gma03g02106 639 CDD PIN_limkain_b1_N_like 18 142 - -
Gma03g02106 639 MobiDBLite consensus disorder prediction 341 395 - -
Gma03g02106 639 Gene3D - 10 161 - -
Gma03g02106 639 MobiDBLite consensus disorder prediction 219 246 - -
Gma03g02106 639 Pfam OST-HTH Associated domain 567 617 IPR025677 -
Gma03g02106 639 PANTHER LIMKAIN B LKAP 1 615 IPR024768 GO:0005777|GO:0010468|GO:1903231
Gma03g02106 639 MobiDBLite consensus disorder prediction 219 313 - -
Gma03g02106 639 Pfam NYN domain 18 154 IPR021139 GO:0004540
Gma03g02106 639 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 1 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02106 Gma-Chr3 46608032 46611343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02106 8 200 C2H2 Transcription Factor Family AT5G61190 68.912 7.85e-84 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02106 - - gmx:100808926 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02142 19 50299601 50304103 Gma03g02106 03 46608032 46611343 ECH
Gma03g02106 03 46608032 46611343 Gma03g02106 03 46608032 46611343 ECH
Gma19g02142 19 50299601 50304103 Gma03g02106 03 46608032 46611343 GST