Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02105 ATGGATGATGATTCAAAAGAGAAGGAAAGGTTGACGTTTAACATAGCGATTATGGTGGCATCCATGATCGCCATTGCAATGGTCACCGTTTCTGTAGTTGCACACACAGACGGTCCCAAACAAGACGCAGGGAAGAATGTGAAGACTCTTCTCTCCGTTTGCTCCAAAACGGAGGATCCAGAAAGCTGTTTCCGCATGCTGAAGCACGTTGGTGAGAAAGCCACAGTTTTGAAAGCGGCTATCAATGCAACCCTCACGGAATTCCTCACGCTTCTGCAGCAAGAGTCATATAAGGATTGTTTGGAACTGCTGAGTTTAGGAATTGAAGAATTACAATCTTTGTATTTCGTGGCAAGTTTTCATGTAGAGTTGTGCAAACTGAACCTAGATGATGTGATGAACAGCCTAAGTGCTGTCATTTCCTATGAGGTTTTGGGGTATTCATTGAAAGTTCCAGTTCTTCTCACGAGGATAGCCTTATCCATTGTTCATAATTTCTCTGAGAGGCCTAATAGAAGAGAAGCACGACTTATGCTAGAAGAATTTCCAAGGTGGTTCCCAGCAACAGAGAGAAAAATGATAGAGTCTAATCAAGGAGATAATGGTGGTGGTGAACAATGGCCAATAAATGTGGTTGTGGCTCAATATGGAAGACGTCATTTGTCGACCATAGCTGACTCAGTACTCAATGCATGTCCAAAGAATAAAACGATAGCATGTGTTATTTATGTGAAAAGAGGTAAGTATGAGAAGAGAGTGGTGATTCCTAAGGGTGTAAACCAAGTGTTCATGTATGGTGATGGACCTGCGCATACCATTGTCACTGATTCCAACACAAGAGACCCCAAGACACTCACAACCTCCTTTCGAGCAGCTACTTTCGTGGTAATGGGGAAAGGATTCATCTGCAAAGACATGGGTTTCACAGCCCCAGCTGACATTGGAGGAGCACCGACACTCCTAGTCCTTTCTGATCACTCAGCATTCTTCAACTGCAAAATTGATGGTAACGAAGGAACCTTGTTGGCAGTAGCTCAACGCCAATTCTACCGAGACTGCGAGATTCTTGGCCGTGTAACTCAAAACTCACATATCATAGTGAAGCCTCGAAATTCCTCTGATTTGGTTTTAAGAAGAAATGTTGTGAGTGCACAATCCAGGTTAGACAAGCATCAGACAACAGGGTTAGTGATTCAAAACTACACCATCACAGCACATGGACAAAACATGAATACTCTTAATGCTACCACTTACTTGCGATCCCCATATAGTGAGTACTCAAGAACGATCATAATGGAATCATTTATAGGAGATGTGATACATCCAAAAGGTTGGTGTAAATGGAGTGACAATGCCATAGAGACAAGAACTGACAAGAGGGTCAAGTGGAATGGATACAGTACAATTTTTGAGAGAGATCAAATGGTTAGTTACACAGTTGGTCGGTTTGTCCAAACAGACCAATGGTTGCTAAATAGAGGCATTCCTTACGAAATTGGGTTTCTTGTACAGAATTAG 1518 0.4242 MDDDSKEKERLTFNIAIMVASMIAIAMVTVSVVAHTDGPKQDAGKNVKTLLSVCSKTEDPESCFRMLKHVGEKATVLKAAINATLTEFLTLLQQESYKDCLELLSLGIEELQSLYFVASFHVELCKLNLDDVMNSLSAVISYEVLGYSLKVPVLLTRIALSIVHNFSERPNRREARLMLEEFPRWFPATERKMIESNQGDNGGGEQWPINVVVAQYGRRHLSTIADSVLNACPKNKTIACVIYVKRGKYEKRVVIPKGVNQVFMYGDGPAHTIVTDSNTRDPKTLTTSFRAATFVVMGKGFICKDMGFTAPADIGGAPTLLVLSDHSAFFNCKIDGNEGTLLAVAQRQFYRDCEILGRVTQNSHIIVKPRNSSDLVLRRNVVSAQSRLDKHQTTGLVIQNYTITAHGQNMNTLNATTYLRSPYSEYSRTIIMESFIGDVIHPKGWCKWSDNAIETRTDKRVKWNGYSTIFERDQMVSYTVGRFVQTDQWLLNRGIPYEIGFLVQN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02105 505 CDD PMEI-like_3 52 167 - -
Gma03g02105 505 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 166 IPR035513 -
Gma03g02105 505 Pfam Pectinesterase 210 486 IPR000070 GO:0030599|GO:0042545
Gma03g02105 505 Pfam Plant invertase/pectin methylesterase inhibitor 52 143 IPR006501 GO:0004857
Gma03g02105 505 Gene3D - 207 501 IPR012334 -
Gma03g02105 505 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7 502 - -
Gma03g02105 505 SUPERFAMILY Pectin lyase-like 207 499 IPR011050 -
Gma03g02105 505 PANTHER PECTINESTERASE 7 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02105 Gma-Chr3 46592083 46594277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02105 2 505 Carbohydrate Esterase AT3G05610 30.397 4.57e-63 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02105 K01051 - gmx:102665007 777.319