Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02102 ATGGAATATCGACGGACCAGTGGTAGGCAGGAAACCGGTGGCCGTGACAGAAGACAATCTAAAAGGGAACAGGCATATCAGGACTCTCTTATTGAGGATTTGTCACAGGATTTTCGTTTGCCAATCAACCACAGGCCAACAGAAAATGTTGATCTGGACAACGTAGAGCAAGCATCTTTGGACACACAGATAACATCATCTAATATTGGCTTTAAGCTCCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAACAAGGAATCATTGAGCCAATAAAATCTGGAATTAGAGATCCAAGGCTGGGGATTGGTAAGCAAGAAGAAGATGATTTCTTTACTGCAGAAGAAAATATCCAGCGAAAAAAACTTGATGTTGAGTTGGAGGAGACAGAGGAACATGTGAAGAAACGGGAGGTCTTGAGAATTTCCTGCAGTTTTTATTACCTGGTGGCTTCTTCTGCCTGCTTCGTGCACATTATGAAAATTCAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGCAAGAAATCCGAAAGGTGTTCTATTGTGATCTCTGCAACAAGCAATACAAATTGGCAATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGTTTCAAACAAATGAAGGAAATGCATGGTAGTAGTAGTCGGGACGATAGGCAAAAGCGAGAACAGCAGCGTCAAGAAAGAGAAATGGCAAAGTTTGCTCAAATTGCTGATGCTCAAAAGCAGCAACGGCTTCAACTGCAACAAGAGTCTGGATCAGCAACAGTTCCATCGGAATCTAAAACTGCTACTGCACTTACGGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCTTCTAAAGGCAGTGGTTCCAAGATTACATTTGGTGCCAAGAAGCAAAATGTTGCAAAGAAGCAAAATGTTCCGATCTCCTCTATATTTAGTAACGATAGCGATGAAGACTAA 990 0.4182 MEYRRTSGRQETGGRDRRQSKREQAYQDSLIEDLSQDFRLPINHRPTENVDLDNVEQASLDTQITSSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGIGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVLRISCSFYYLVASSACFVHIMKIQVLAEREQKIQTEVQEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGSSSRDDRQKREQQRQEREMAKFAQIADAQKQQRLQLQQESGSATVPSESKTATALTDQEQRNTLKFGFSSKGSGSKITFGAKKQNVAKKQNVPISSIFSNDSDED 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02102 329 MobiDBLite consensus disorder prediction 217 329 - -
Gma03g02102 329 MobiDBLite consensus disorder prediction 252 323 - -
Gma03g02102 329 SUPERFAMILY beta-beta-alpha zinc fingers 184 220 IPR036236 -
Gma03g02102 329 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Gma03g02102 329 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Gma03g02102 329 MobiDBLite consensus disorder prediction 1 28 - -
Gma03g02102 329 MobiDBLite consensus disorder prediction 217 247 - -
Gma03g02102 329 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 328 - -
Gma03g02102 329 SMART G-patch_5 64 109 IPR000467 GO:0003676
Gma03g02102 329 Pfam Zinc-finger double-stranded RNA-binding 186 213 IPR022755 -
Gma03g02102 329 ProSitePatterns Zinc finger C2H2 type domain signature. 188 210 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02102 Gma-Chr3 46570343 46574000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02102 1 329 C2H2 Transcription Factor Family AT5G26610 59.337 3.75e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02102 - - gsj:114407513 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02102 03 46570343 46574000 Gma03g02102 03 46570343 46574000 ECH
Gma19g02138 19 50279350 50282403 Gma03g02102 03 46570343 46574000 GST