Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02096 ATGGAGAGAGTTTTGTGGGTTGACATTGCTATAGGACTTGTTGTTTTCAGCAACTGGGTCGATGGGTTCGTAGGATATGAACATCACTTCAATGAAACAGAGTTGTCTTTATTAGAGGCTCATGAAGCTTCCTTGTCCTACGCCGGGACCGAGAGGAATAATCTTCTGCTGGTAGGACTCACCCTTATTCAAAATGCTGCTGCTAAAGGAGCAGTCTGCTTGGACGGAACATTACCTGGTTATCATTTGCATCGGGGATATGGATCAGGAGCAAATAGCTGGCTTATTAATTTAGAGGGTGGTGGATGGTGTAATAATATTAGAACATGTGTTTATCGCAAGAAAACCCGGCGTGGATCATCAGATTTCATGGAAAAGGAGATACCTTTTACTGGTATATTAAGTAATAAGGCTGAAGAAAACCCAGATTTTTTCAATTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTACTGGGGATAGTGAAGATGAGACTGCAGAACTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCAATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCAGTCAGGCTATTCTTTCGGGATGCTCTGCGGGTGGCCTGGCTACTATTATTCATTGTGATGAATTTCGTGGTCTCTTTCCAAGGACCACCAAAGTGAAATGTCTTAGTGATGCTGGGTTGTTTCTTGATGCGATTGATGTATCTGGTGGGCATACCCTTAGGAATTTATACAGTGGAGTTGTAGGATTGCAGGGAGCACAGAAGAATCTGCCACAGATTTGTACTAATCACCTTGATCCCATCTCGtgcttctttcctcaaaacttgattgccagtgttaagactccgctattcatTCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGCTTAGCTCCTCCATCTGCAGATCCCCATGGCTATTGGCATGAATGTagattaaaccatgctaaatgtactggaccacaaatccaatttctgcaaggattcagaaatcacatgctgaatgctattaaatacttctcaagatcaaagcagaatggcttgtttattaattcttgtttttctcactgccaaactgagaggcaggatacatggtttgctgacaattctcctgttatcaggaacaagGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCGATCGAGCAGGTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGCCATCATCTGATTTTCAGATGA 1266 0.3507 MERVLWVDIAIGLVVFSNWVDGFVGYEHHFNETELSLLEAHEASLSYAGTERNNLLLVGLTLIQNAAAKGAVCLDGTLPGYHLHRGYGSGANSWLINLEGGGWCNNIRTCVYRKKTRRGSSDFMEKEIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFTGDSEDETAELQFRGQRIWAAAMEDLMSKGMRFASQAILSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDAIDVSGGHTLRNLYSGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIASVKTPLFILNAAYDSWQIQSSLAPPSADPHGYWHECRLNHAKCTGPQIQFLQGFRNHMLNAIKYFSRSKQNGLFINSCFSHCQTERQDTWFADNSPVIRNKAIALAVGDWYFDRAGVKAIDCPYPCDNTCHHLIFR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02096 421 PANTHER PECTIN ACETYLESTERASE 3 420 - -
Gma03g02096 421 Pfam Pectinacetylesterase 56 400 IPR004963 GO:0016787
Gma03g02096 421 PANTHER NOTUM-RELATED 3 420 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02096 Gma-Chr3 46496461 46500874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02096 57 421 Carbohydrate Esterase AT1G57590 74.521 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02096 K19882 - gmx:100782401 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02132 19 50212774 50217344 Gma03g02096 03 46496461 46500874 ECH
Gma03g02096 03 46496461 46500874 Gma19g02132 19 50212774 50217344 ECH
Gma03g02096 03 46496461 46500874 Gma03g02096 03 46496461 46500874 ECH
Gma03g02096 03 46496461 46500874 Gma10g01405 10 40932160 40937393 ECH
Gma03g02096 03 46496461 46500874 Gma20g00896 20 35338894 35343254 ECH
Gma17g00400 17 3245963 3250803 Gma03g02096 03 46496461 46500874 ECH
Gma19g02132 19 50212774 50217344 Gma03g02096 03 46496461 46500874 GST
Gma03g02096 03 46496461 46500874 Gma10g01405 10 40932160 40937393 PCT
Gma03g02096 03 46496461 46500874 Gma20g00896 20 35338894 35343254 PCT
Gma10g01405 10 40932160 40937393 Gma03g02096 03 46496461 46500874 PCT
Gma20g00896 20 35338894 35343254 Gma03g02096 03 46496461 46500874 PCT