Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02088 ATGGGGTTTCTGGTTCCGCTTTTCTTCCACATCGTCGCTTTCATTTGCACCATTGCAGCTATCGCTTTGGCCGTTCTTCACATTTACAGGCACCTTCTCAATTACACCGAGCCCACTTATCAGCGTTACATCGTTCGGATTATTTTCATGGTCCCGGTTTATGCACTAATGTCATTCTTGTCCCTTGTAATACCTGACAGTTCAATCTATTTTAATTCTATCCGGGAAGTCTATGAAGCTTGGGTAATTTATAATTTTCTATCACTGTGTCTGGCATGGGTTGGTGGTCCTGGAGCTGTTGTAATAAGTTTGAGTGGTCGAGTTCTGAAGCCATCATTTTGTCTGATGACTTGTTGCTTTCCTCCTATACCGCTGGATGGGCGTTTCATACGTAAATGCAAGCAAGGATGTCTGCAATTTGTGATTTTGAAGCCCATTTTAGTTGTTGTTACACTTATACTTTATGCAAAGGGGAAGTATAAGGATGGAAATTTCAATCCAAAGCAGTCATACTTGTATCTTACGATCATTTATATGATCTCATATACAATGGCTCTCTATGTGCTTGCTTTGTTTTATGTGGCATGCAAGGATCTGCTTCAACCATTCAATCCAGTTCCGAAGTTTATTATAATAAAATCTGTTGTATTCCTGACTTATTGGCAGGGCGTGTTATTCTTCCTTGCTGCAAAGTCGGGATTCATTGAGGATGCTGATGAAGCTGCCCTACTTCAAAATTTTATCATTTGTGTTGAGATGCTTGTTGCTGCCGTAGGCCACTTTTATGCATTTCCATACAAAGAATATGCTGGTGCTAATATAGGTGGATCCCGTGGTTTGACAGCTAGCCTTGGGCATGCTTTGAAGTTAAATGATTTTTACCATGATACAGTCCACCAGTTTGCACCAACCTATCACGAATATGTTCTTTATAATCACAGCGAAGGTGAGGAGGGAACTAAGAAGTACAGGTCACGAACTTTTGTTCCAATTGGCCCAGAGATGGATTCTGTGAGAAGAAATAAACATATGTTTGGAAACAAGTTAGATGACATACAGCTCTCAAAACCATACGACTTGACCCTCATTGACTTGGATGTATCCAGTTACCCTGAAGAAGTTCCTGCGGCTGATAAAGTTGGTGGTAGAACTTCATCTGTTTTCTTTGTCCTCACCAAGCCAGAGAGAGAAATGGAAGAAGGATCATGTGTATGCTTAGTTGTCATACTGATACTTGCTCTAACATTGGCATGGAGGGTGCTGAACTGGTTATGGCTAAGGCCAAAGAGGTTAGAGAGGCTCCTAAGAGAGCAAGGCCTTCAAGGAAATCCCTACAGGCTTTTGGTTGGGGATTTAAAGGAGATTATGAATATGCAAAAGGAAGTCACATCCAAACCCATGAATCTCTCCCATGATATAGTGCCTCGTGTCTTTTCCTTTCTCCAACACACTCTCAACACACATGgcaagaattcttttatttggtttgggcgaaaaccaagggtgatcatcacagagcctgagttaatcaaagatgtacttaataagatgcatgatttcccaaagcctgacacgagtccgcttgtcaagttacttgctactggtcttttaaaccatgagggagaaaaatggaacaagcacagaagaataattagccctgcattcaatttagaaaaattgaagaatatgttaccaatattctacaaaagttgcaatgatttaattatcaagtgggaggaaatgttgtcttctgatggatcatgtgaaattgacgtatggcctttccttcaaaatttatctagtgatgctattgctcgaacagcatttggaagtagttatgaagaaggaagaaaaatatttcaacttctaaaagagcaagcagaacttgcaatgaaagctacaatgaaactttacatccctggatggagatttctacctactgctaaccataggaggatgaaggaaattgatagagaaataaaagcttcacttacagatatgattagcaacagagagaaagcactaaaggcgggtgaggctaccgagaatgacttgttaggtatacttttggagtcaaatcacaaggaaactgaagaacatggaaacagtaagaatgttggaatgagtcttgaagatgtaatcgaggaatgcaagctattctacttcgcagggcaagagaccacttcagctttacttgtttggaccatggtgttgttaagtaggtaccctgattggcaagcacgtgcgagggaggaagttttacaagtatttggcaaacaaaaaccaaattttgatgggctaagtcaccttaagattgtcagcatgattttgaatgaggttcttaggctatacccaccagcagttggccttaatagaaatgttgacagagatatgaaactcggaaacctatcattacctgctggagtgcaagtttccttaccaacaactatggttcaccatgaccgcgaactctggggtgatgatgtgaatgaattcaaacctgagagattttctgaaggagttctgaaggccacaaatggcagagtttcattttttccatttggatggggtcctagaatatgcattggacaaaacttttccttgttggaggcaaagatggctttgtcaacgattttacaacatttctcatttgaactttctccagcttatgctcatgctcctgttacagtatttactcttcagccccaatatggtgctcatgtcattttacgtaaAGTTGAAATATAA 2748 0.2216 MGFLVPLFFHIVAFICTIAAIALAVLHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVIPDSSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVISLSGRVLKPSFCLMTCCFPPIPLDGRFIRKCKQGCLQFVILKPILVVVTLILYAKGKYKDGNFNPKQSYLYLTIIYMISYTMALYVLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLFFLAAKSGFIEDADEAALLQNFIICVEMLVAAVGHFYAFPYKEYAGANIGGSRGLTASLGHALKLNDFYHDTVHQFAPTYHEYVLYNHSEGEEGTKKYRSRTFVPIGPEMDSVRRNKHMFGNKLDDIQLSKPYDLTLIDLDVSSYPEEVPAADKVGGRTSSVFFVLTKPEREMEEGSCVCLVVILILALTLAWRVLNWLWLRPKRLERLLREQGLQGNPYRLLVGDLKEIMNMQKEVTSKPMNLSHDIVPRVFSFLQHTLNTHGKNSFIWFGRKPRVIITEPELIKDVLNKMHDFPKPDTSPLVKLLATGLLNHEGEKWNKHRRIISPAFNLEKLKNMLPIFYKSCNDLIIKWEEMLSSDGSCEIDVWPFLQNLSSDAIARTAFGSSYEEGRKIFQLLKEQAELAMKATMKLYIPGWRFLPTANHRRMKEIDREIKASLTDMISNREKALKAGEATENDLLGILLESNHKETEEHGNSKNVGMSLEDVIEECKLFYFAGQETTSALLVWTMVLLSRYPDWQARAREEVLQVFGKQKPNFDGLSHLKIVSMILNEVLRLYPPAVGLNRNVDRDMKLGNLSLPAGVQVSLPTTMVHHDRELWGDDVNEFKPERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSLLEAKMALSTILQHFSFELSPAYAHAPVTVFTLQPQYGAHVILRKVEI 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02088 915 PRINTS E-class P450 group I signature 732 758 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 PRINTS E-class P450 group I signature 851 861 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 PRINTS E-class P450 group I signature 712 729 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 PRINTS E-class P450 group I signature 861 884 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 PRINTS E-class P450 group I signature 599 617 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 PRINTS E-class P450 group I signature 485 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 Pfam Organic solute transporter Ostalpha 11 269 IPR005178 -
Gma03g02088 915 PANTHER CYTOCHROME P450-LIKE 405 910 - -
Gma03g02088 915 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 854 863 IPR017972 GO:0005506|GO:0016705
Gma03g02088 915 Pfam Cytochrome P450 478 889 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 SUPERFAMILY Cytochrome P450 474 911 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 PANTHER CYTOCHROME P450 FAMILY MEMBER 405 910 - -
Gma03g02088 915 PRINTS P450 superfamily signature 775 786 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 PRINTS P450 superfamily signature 861 872 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 PRINTS P450 superfamily signature 852 861 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 PRINTS P450 superfamily signature 723 740 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma03g02088 915 Gene3D Cytochrome P450 425 914 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02088 Gma-Chr3 46433357 46441204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02088 417 913 Cytochrome P450 AT3G14610 58.517 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02088 - K23809 gmx:100780780 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02088 03 46433357 46441204 Gma10g01397 10 40821630 40825638 PCT
Gma03g02088 03 46433357 46441204 Gma20g00888 20 35223342 35227286 PCT