LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma03g02088	ATGGGGTTTCTGGTTCCGCTTTTCTTCCACATCGTCGCTTTCATTTGCACCATTGCAGCTATCGCTTTGGCCGTTCTTCACATTTACAGGCACCTTCTCAATTACACCGAGCCCACTTATCAGCGTTACATCGTTCGGATTATTTTCATGGTCCCGGTTTATGCACTAATGTCATTCTTGTCCCTTGTAATACCTGACAGTTCAATCTATTTTAATTCTATCCGGGAAGTCTATGAAGCTTGGGTAATTTATAATTTTCTATCACTGTGTCTGGCATGGGTTGGTGGTCCTGGAGCTGTTGTAATAAGTTTGAGTGGTCGAGTTCTGAAGCCATCATTTTGTCTGATGACTTGTTGCTTTCCTCCTATACCGCTGGATGGGCGTTTCATACGTAAATGCAAGCAAGGATGTCTGCAATTTGTGATTTTGAAGCCCATTTTAGTTGTTGTTACACTTATACTTTATGCAAAGGGGAAGTATAAGGATGGAAATTTCAATCCAAAGCAGTCATACTTGTATCTTACGATCATTTATATGATCTCATATACAATGGCTCTCTATGTGCTTGCTTTGTTTTATGTGGCATGCAAGGATCTGCTTCAACCATTCAATCCAGTTCCGAAGTTTATTATAATAAAATCTGTTGTATTCCTGACTTATTGGCAGGGCGTGTTATTCTTCCTTGCTGCAAAGTCGGGATTCATTGAGGATGCTGATGAAGCTGCCCTACTTCAAAATTTTATCATTTGTGTTGAGATGCTTGTTGCTGCCGTAGGCCACTTTTATGCATTTCCATACAAAGAATATGCTGGTGCTAATATAGGTGGATCCCGTGGTTTGACAGCTAGCCTTGGGCATGCTTTGAAGTTAAATGATTTTTACCATGATACAGTCCACCAGTTTGCACCAACCTATCACGAATATGTTCTTTATAATCACAGCGAAGGTGAGGAGGGAACTAAGAAGTACAGGTCACGAACTTTTGTTCCAATTGGCCCAGAGATGGATTCTGTGAGAAGAAATAAACATATGTTTGGAAACAAGTTAGATGACATACAGCTCTCAAAACCATACGACTTGACCCTCATTGACTTGGATGTATCCAGTTACCCTGAAGAAGTTCCTGCGGCTGATAAAGTTGGTGGTAGAACTTCATCTGTTTTCTTTGTCCTCACCAAGCCAGAGAGAGAAATGGAAGAAGGATCATGTGTATGCTTAGTTGTCATACTGATACTTGCTCTAACATTGGCATGGAGGGTGCTGAACTGGTTATGGCTAAGGCCAAAGAGGTTAGAGAGGCTCCTAAGAGAGCAAGGCCTTCAAGGAAATCCCTACAGGCTTTTGGTTGGGGATTTAAAGGAGATTATGAATATGCAAAAGGAAGTCACATCCAAACCCATGAATCTCTCCCATGATATAGTGCCTCGTGTCTTTTCCTTTCTCCAACACACTCTCAACACACATGgcaagaattcttttatttggtttgggcgaaaaccaagggtgatcatcacagagcctgagttaatcaaagatgtacttaataagatgcatgatttcccaaagcctgacacgagtccgcttgtcaagttacttgctactggtcttttaaaccatgagggagaaaaatggaacaagcacagaagaataattagccctgcattcaatttagaaaaattgaagaatatgttaccaatattctacaaaagttgcaatgatttaattatcaagtgggaggaaatgttgtcttctgatggatcatgtgaaattgacgtatggcctttccttcaaaatttatctagtgatgctattgctcgaacagcatttggaagtagttatgaagaaggaagaaaaatatttcaacttctaaaagagcaagcagaacttgcaatgaaagctacaatgaaactttacatccctggatggagatttctacctactgctaaccataggaggatgaaggaaattgatagagaaataaaagcttcacttacagatatgattagcaacagagagaaagcactaaaggcgggtgaggctaccgagaatgacttgttaggtatacttttggagtcaaatcacaaggaaactgaagaacatggaaacagtaagaatgttggaatgagtcttgaagatgtaatcgaggaatgcaagctattctacttcgcagggcaagagaccacttcagctttacttgtttggaccatggtgttgttaagtaggtaccctgattggcaagcacgtgcgagggaggaagttttacaagtatttggcaaacaaaaaccaaattttgatgggctaagtcaccttaagattgtcagcatgattttgaatgaggttcttaggctatacccaccagcagttggccttaatagaaatgttgacagagatatgaaactcggaaacctatcattacctgctggagtgcaagtttccttaccaacaactatggttcaccatgaccgcgaactctggggtgatgatgtgaatgaattcaaacctgagagattttctgaaggagttctgaaggccacaaatggcagagtttcattttttccatttggatggggtcctagaatatgcattggacaaaacttttccttgttggaggcaaagatggctttgtcaacgattttacaacatttctcatttgaactttctccagcttatgctcatgctcctgttacagtatttactcttcagccccaatatggtgctcatgtcattttacgtaaAGTTGAAATATAA	2748	0.2216	MGFLVPLFFHIVAFICTIAAIALAVLHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVIPDSSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVISLSGRVLKPSFCLMTCCFPPIPLDGRFIRKCKQGCLQFVILKPILVVVTLILYAKGKYKDGNFNPKQSYLYLTIIYMISYTMALYVLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLFFLAAKSGFIEDADEAALLQNFIICVEMLVAAVGHFYAFPYKEYAGANIGGSRGLTASLGHALKLNDFYHDTVHQFAPTYHEYVLYNHSEGEEGTKKYRSRTFVPIGPEMDSVRRNKHMFGNKLDDIQLSKPYDLTLIDLDVSSYPEEVPAADKVGGRTSSVFFVLTKPEREMEEGSCVCLVVILILALTLAWRVLNWLWLRPKRLERLLREQGLQGNPYRLLVGDLKEIMNMQKEVTSKPMNLSHDIVPRVFSFLQHTLNTHGKNSFIWFGRKPRVIITEPELIKDVLNKMHDFPKPDTSPLVKLLATGLLNHEGEKWNKHRRIISPAFNLEKLKNMLPIFYKSCNDLIIKWEEMLSSDGSCEIDVWPFLQNLSSDAIARTAFGSSYEEGRKIFQLLKEQAELAMKATMKLYIPGWRFLPTANHRRMKEIDREIKASLTDMISNREKALKAGEATENDLLGILLESNHKETEEHGNSKNVGMSLEDVIEECKLFYFAGQETTSALLVWTMVLLSRYPDWQARAREEVLQVFGKQKPNFDGLSHLKIVSMILNEVLRLYPPAVGLNRNVDRDMKLGNLSLPAGVQVSLPTTMVHHDRELWGDDVNEFKPERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSLLEAKMALSTILQHFSFELSPAYAHAPVTVFTLQPQYGAHVILRKVEI	915

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma03g02088	915	PRINTS	E-class P450 group I signature	732	758	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma03g02088	915	PRINTS	E-class P450 group I signature	851	861	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma03g02088	915	PRINTS	E-class P450 group I signature	712	729	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma03g02088	915	PRINTS	E-class P450 group I signature	861	884	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma03g02088	915	PRINTS	E-class P450 group I signature	599	617	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma03g02088	915	PRINTS	E-class P450 group I signature	485	504	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma03g02088	915	Pfam	Organic solute transporter Ostalpha	11	269	IPR005178	-
Gma03g02088	915	PANTHER	CYTOCHROME P450-LIKE	405	910	-	-
Gma03g02088	915	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	854	863	IPR017972	GO:0005506\|GO:0016705
Gma03g02088	915	Pfam	Cytochrome P450	478	889	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma03g02088	Gma-Chr3	46433357	46441204	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma03g02088	417	913	Cytochrome P450	AT3G14610	58.517	0.0	619

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma03g02088	-		K23809	gmx:100780780	1009.59

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma03g02088	03	46433357	46441204	Gma10g01397	10	40821630	40825638	PCT
	Gma03g02088	03	46433357	46441204	Gma20g00888	20	35223342	35227286	PCT

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